ggKbase home page

scnpilot_solids1_trim150_scaffold_287_curated_38

Organism: solids_Stenotrophomonas_1

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 2 ASCG 12 / 38
Location: comp(31233..31907)

Top 3 Functional Annotations

Value Algorithm Source
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.8
  • Coverage: 224.0
  • Bit_score: 406
  • Evalue 3.20e-110
rpe; Ribulose-phosphate 3-epimerase (EC:5.1.3.1); K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1] similarity KEGG
DB: KEGG
  • Identity: 86.7
  • Coverage: 225.0
  • Bit_score: 393
  • Evalue 4.80e-107
Ribulose-phosphate 3-epimerase n=2 Tax=Xanthomonas campestris pv. translucens RepID=K8Z6V9_XANCT similarity UNIREF
DB: UNIREF100
  • Identity: 86.4
  • Coverage: 221.0
  • Bit_score: 394
  • Evalue 6.80e-107

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudoxanthomonas suwonensis → Pseudoxanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 675
ATGTCCAACTGCATCATCGCCCCGTCCATCCTCTCGGCCGATTTCGCCCGGCTCGGCGAGGAGGTCGACACCGTCCTCGCCGCCGGTGCCGACTGGGTCCATTTCGACGTGATGGACAACCATTACGTGCCCAACCTGACCATCGGCCCGATGGTTTGCCAGGCGCTGCGCAGGCATGGCGTGACCGCACCGATCGACGTGCACCTGATGGTCGAGCCGGTGGACCGCATCGTGCCGGACTTCGCCGAGGCCGGCGCCAGCCTCATCAGCTTCCACCCGGAAGCGTCGCGGCACGTCCACCGCACCATCCAGCTGATCAGGTCGCACGGCTGCAAGGCCGGCCTGGTGCTCAACCCGGCGACCCCGGTGGAAGTGCTGGACTGGGTGCTGGAGGACCTGGACCTGGTGCTGCTGATGTCGGTCAACCCCGGCTTCGGCGGCCAGGCCTTCATTCCCTCGACCCTGGAGAAGCTGCGCGCGGTGCGGGCGATGATCGACAAGCTCGGCAAGCCGGTGATCCTGGAAGTGGACGGTGGCGTGAAGGCCGACAACATCGGGCAGATCGCCGCCGCCGGTGCCGATGCCTTCGTCGCCGGCTCGGCCATCTTCAACGCCCCGGACTACGCGCAGGTGATCGCGCAGATGCGCGCCAACGTCGCCGCGGCGCGGGGCTGA
PROTEIN sequence
Length: 225
MSNCIIAPSILSADFARLGEEVDTVLAAGADWVHFDVMDNHYVPNLTIGPMVCQALRRHGVTAPIDVHLMVEPVDRIVPDFAEAGASLISFHPEASRHVHRTIQLIRSHGCKAGLVLNPATPVEVLDWVLEDLDLVLLMSVNPGFGGQAFIPSTLEKLRAVRAMIDKLGKPVILEVDGGVKADNIGQIAAAGADAFVAGSAIFNAPDYAQVIAQMRANVAAARG*