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scnpilot_solids1_trim150_scaffold_174_curated_5

Organism: solids_Stenotrophomonas_1

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 2 ASCG 12 / 38
Location: comp(5079..9242)

Top 3 Functional Annotations

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Value Algorithm Source
ATP dependent RNA helicase; K03578 ATP-dependent helicase HrpA [EC:3.6.4.13] similarity KEGG
DB: KEGG
  • Identity: 80.0
  • Coverage: 999.99
  • Bit_score: 2187
  • Evalue 0.0
ATP dependent RNA helicase n=2 Tax=Xanthomonas campestris pv. campestris RepID=Q4UXI9_XANC8 similarity UNIREF
DB: UNIREF100
  • Identity: 80.0
  • Coverage: 999.99
  • Bit_score: 2187
  • Evalue 0.0
Strain LMCP11 contig_2, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ29838.1}; TaxID=339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.8
  • Coverage: 999.99
  • Bit_score: 2188
  • Evalue 0.0

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Taxonomy

Xanthomonas campestris → Xanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4164
ATGAGCGCTATCGAAAAGGACACTGCCGCGCGCCTGCGCGAAGCCCGCACGGCCATCGACGGGGCGATGAGCCGCGACCGCGGGCGACTGCTCGGGCTGTGGTCGCGCTGGCAGGGCCGGCCGGCCGATGCCGCCGCCGAAGCGGCGTTCCGCGGCCTGCTGGAACAGTCCCGGGGCCAGCGCCGGCGGCGTGCGGCGCAGCCGGTCGCGATCAGCATGGACGACGCGCTGCCGATCGCGCGTGAAGCCGAGCGGATCACCGCGCTGATCCGCGACCACCAGGTGGTGGTGATCGCCGGCGAGACCGGTTCGGGCAAGACCACCCAGCTGCCCAAGCTGTGCCTGGCCGCCGGGCGCGGCGAGGCCGGCATGATCGGCTGCACCCAGCCGCGGCGCATCGCCGCGCGCGCGGTGGCCACCCGCGTGGCCGAGGAACTGGGCAGCGAACTGGGCACGGTGGTCGGCTACCAGGTGCGCTTCACCGACAAGGTCGGCGAGGACAGCCGCATCAAGTTCATGACCGACGGCATCCTGCTGGCCGAGATCGCGTCCGACCGCTGGCTGTCGCGTTACGACACGCTGATCATCGACGAGGCGCACGAACGCAGCCTCAACATCGATTTCCTGCTCGGCTATCTCAAGCAGCTGCTGCGCCGGCGCCCGGACCTGAAGCTGGTGGTGACCTCGGCGACCATCGACACCGAGCGCTTCTCGCGTCATTTCGACGATGCGCCGGTGGTCAGCGTCGAGGGCCGCACCTACCCGGTGGAAGTGCGCTACCGGCCGCTGGACGAGGCGCGGCCGGCGCCGGTCGCAGAGGGCAGGGGCGGTGGACGCGGGCGCGGCGACGATGCCGACTCGGACCCGGTGTCGGTCAATGACGCCATCGTCGCCGCGGTCGACGAGATCACCCGCCTGGATCCGCGCGGCGACGTGCTGGTGTTCCTGCCCGGCGAGCGCGAGATCCGCGACGCGCACCAGGCGCTGGAACGGCGCAAGTACCGCGAGACCGAGGTGCTGCCGCTGTACGCGCGGCTCTCGGCCAAGGACCAGGACCGGGTGTTCAACCCGGGGCCGAAGCGGCGCCTGGTGCTGACCACCAACGTCGCCGAGACCTCGCTGACGGTGCCGCGCATCCGGTACGTGGTCGATCCGGGCTACGCCCGGGTCAAGCGCTACAGCCCGCGGCAGAAGCTGGACCGGCTGCACATCGAACCGGTGTCGCAGGCCAGCGCCAACCAGCGCAAGGGCCGCTGCGGGCGTATCGCCGAGGGCGTGTGCTACCGCCTGTACGCCGAGGCTGATTTCCAGGCGCGCCCGGAATTCACCGATCCGGAGATCCGCCGTTCCTCGCTGGCCGGGGTGATCCTGCGCATGCTGCAGCTGGGCCTCGGGCGGATCGAGGATTTCCCGTTCCTGGAGCCGCCGGACGAACGCGCGGTCGCCGACGGCTGGCAGCAGCTGGCCGAGCTGGGCGCGATCGACGGCGAGCGCAAGCTCACCGCCATCGGCCGGCAGATGGCGCGGTTGCCGGTGGACGTGAAGCTGGCGCGCATGCTGGTGGCCGCGCAGAAGGCCGGCTGTCTGCACGAGATGCTGGTGATCGCCTCCTTCCTGGGCATCCAGGACCCGCGCGAACGGCCGCCGGAAGCGCGCGAGGCCGCCGACAACGCGCATGCGGCCTTCGCCGACCCGCGTTCGGAATTCCTCGGCATCCTGCGCCTGTGGGAAGGCTACCGGGCCGCGCACGAAGACCTGACCCAATCCAAACTGCGCGACTGGTGCGGCCGGCATTTCCTCGGCTTCCTGCGCATGCGCGAATGGCGCGAACTGCACCGCCAGCTGCGCCTGCTGTGCGAGGAGCTGGGCTGGGACAGCAGCAGCGATGGCGCCTTCGGCACGGCGCTGCTTGCCGCGCCGGCCGCGCTGCCGGCAGGCGGCGATGGCGAAGCCAGGCGCAAGGCCACGCGCGGCGAACTGCACAAGGCGGCGCGGCTGGCACGCGAAGGCGCGAAGCCGGCGCAATCGGTGACCGGGCCGGATGTCCCGGGGTCCGGCGCAGCCGCCCGGCCAGGCAAGGCAAAAACCGACTCCGCCCCCGGTTCCGCCGCGGTACCGGAGAAGGTGCGGGTGGCGGCCTACCAGGCGCTGCACCGGGCGATCCTCGCCGGGCTGCCGACGCAGATCGGCCACCGTACCGAGAAGGGCGACTTCCAGGCGCCGCGCCAGCGCCGCTTCCACCTGTTCCCGGGCTCGGCGCTGGCCAGGCGGCCGCCGCCGTGGGTGCTGAGCGCGACCCTGCTCGATACCCAGCGCGTATGGGGCCTGACCAATGCCGCCATCGAGCCGGACTGGGCGATCGCCGAGCTGCCGCACCTGCTGGCGCGCAAGCATTTCGACCCGCACTGGTCGCGTGCCCAGGGCCAGGTGCTGGCGGCCGAGCAGATCAGCCTGTTCGGGCTGGTGCTGGCGCCGCGCAAGCCGGTGCATTACGGCCGCATCAACCCGGGCGAAGCGCACGACATCTTCGTGCGGCAGGCGCTGGTCACCGGTGAGATCAACACCCGTGCCGGCTTCGTCGCCGACAACCTCAAGGTGCTGGAGCAGGCGCGCGAGGAGGAAGCCAAGCTGCGCCGCGCCGGCATCGTCGCCGACGAGGACTGGCAGGCGCGCTGGTACCTGGGCCGCATTCCGGCCGATATCCATTCGGCCAGTGGGCTGGATGCCTGGTGGAAGGCGTTGCCGCCCGGGCAGCAGCGCACGCTGCGCTGGTCGCTGACCGACCTGCTGCCGGGCGAAGGCAGCGAGCAGGAGCGGTATCCGAAATATTTCGCGCTGGGCGATGCGCGGCTGGCGATGCATTACCGCTTCGAGCCCGGCGCGGCGGACGACGGCGTCACCCTCGACGTGCCGCTGCACCTGCTCAACGCGCTGGACCCGGCGCGGCTGTCATGGCTGGCGCCGGGCTTCGTCGCCGACAAGGCCGCGGCACTGATCCGCAGCCTGCCCAAGGCGATGCGCCGCAACTACGTGCCGGCACCGGACTTCGCCCGCGCCTTCTTCGAGGCATGGCCGCAGCCCTCGGCCGACGACATCCGCGGTGAACTTGCGCGGTTCCTGTCGAAAGCCACCGGCGCGGCGGTGGCCGCCACCGATTTCGACGAGGCGGCGCTGGAGCCGCACCTGCGCATGAACCTGCGCCTGGCCGATGCCGAGGGCCGGCTGCTGGCGATGTCGCGCGATCTCGATGCGCTGCGCGCACGCTTCGGCGAGCGCGCCGGGCAGGCGTTCGCGGCGCGTGCCGGCAAGGCGCTGGCTGCCGAGGGGCTGCGCGAATTCCCGGCCGGCGCCATTCCCGGGCAGGTGCCCGGCGAAGCCGGCGTGCCGGCGTATCCGGCGCTGGTCGATACCGGCGAGACGGCGGCGCTGCGCATCTTCGCCGACCGCAACGCGGCGCTGCTGGCGCATCCGGGCGGGGTGCGGCGCCTGCTGGAAATCGCCCTGGCCGACAAGGTCAAGCAGGCCCGCAAGCAGTTGCCGGTATCGCCCAAGACCGGGTTGCTGTATGCGGCCATCGAATCGCAGGAAAGGCTGCGCGGCGACCTGGTCGATGCGGCCATGAACGCGGTGCTGGCCGATGGCCTGGGCGAGATCCGCTCGGCGGAGGCTTTCGAGCTGCGCCGTGCCGATGCCGGCAAGCGCCTGTTCGGCGAAGCGATGGAGCGGCTGCGCCTGGCCGAGACCATCCTCGGCCTGGTGGGCGAGCTCAAGCCGCTGCTGGAAGCGCCGTTGATGGGCTGGGCGCGCGGCAACCTCGACGACATGGAACGGCAGCTGGCGTCGCTGGTCCACGCCGGCTTCCTGCGACAGACCCCCGCCGACGCGCTGGCGCAGTTCCCGCGCTACCTGAAGGCGATGATCCTGCGCAGCGAACGCGCCAAGCGCGACCCGCCGCGCGACCAGGCGCGCATGCTTGAGCTCAAGCCCTTCGTCGATGCGCTGGAGGAGGCGCGGCTGCAGGGTCAGGCCGCGCACCCGCAATGGTCGGCGCTGCGCTGGGACATCGAGGAACTGCGGGTATCGCTGTTCGCGCAGGAACTGGGCTTCCGCTCCGGCATCTCGCCGAAGAAGCTGGCGCAGCGGGTCGCTTCACTGCGTGGTTGA
PROTEIN sequence
Length: 1388
MSAIEKDTAARLREARTAIDGAMSRDRGRLLGLWSRWQGRPADAAAEAAFRGLLEQSRGQRRRRAAQPVAISMDDALPIAREAERITALIRDHQVVVIAGETGSGKTTQLPKLCLAAGRGEAGMIGCTQPRRIAARAVATRVAEELGSELGTVVGYQVRFTDKVGEDSRIKFMTDGILLAEIASDRWLSRYDTLIIDEAHERSLNIDFLLGYLKQLLRRRPDLKLVVTSATIDTERFSRHFDDAPVVSVEGRTYPVEVRYRPLDEARPAPVAEGRGGGRGRGDDADSDPVSVNDAIVAAVDEITRLDPRGDVLVFLPGEREIRDAHQALERRKYRETEVLPLYARLSAKDQDRVFNPGPKRRLVLTTNVAETSLTVPRIRYVVDPGYARVKRYSPRQKLDRLHIEPVSQASANQRKGRCGRIAEGVCYRLYAEADFQARPEFTDPEIRRSSLAGVILRMLQLGLGRIEDFPFLEPPDERAVADGWQQLAELGAIDGERKLTAIGRQMARLPVDVKLARMLVAAQKAGCLHEMLVIASFLGIQDPRERPPEAREAADNAHAAFADPRSEFLGILRLWEGYRAAHEDLTQSKLRDWCGRHFLGFLRMREWRELHRQLRLLCEELGWDSSSDGAFGTALLAAPAALPAGGDGEARRKATRGELHKAARLAREGAKPAQSVTGPDVPGSGAAARPGKAKTDSAPGSAAVPEKVRVAAYQALHRAILAGLPTQIGHRTEKGDFQAPRQRRFHLFPGSALARRPPPWVLSATLLDTQRVWGLTNAAIEPDWAIAELPHLLARKHFDPHWSRAQGQVLAAEQISLFGLVLAPRKPVHYGRINPGEAHDIFVRQALVTGEINTRAGFVADNLKVLEQAREEEAKLRRAGIVADEDWQARWYLGRIPADIHSASGLDAWWKALPPGQQRTLRWSLTDLLPGEGSEQERYPKYFALGDARLAMHYRFEPGAADDGVTLDVPLHLLNALDPARLSWLAPGFVADKAAALIRSLPKAMRRNYVPAPDFARAFFEAWPQPSADDIRGELARFLSKATGAAVAATDFDEAALEPHLRMNLRLADAEGRLLAMSRDLDALRARFGERAGQAFAARAGKALAAEGLREFPAGAIPGQVPGEAGVPAYPALVDTGETAALRIFADRNAALLAHPGGVRRLLEIALADKVKQARKQLPVSPKTGLLYAAIESQERLRGDLVDAAMNAVLADGLGEIRSAEAFELRRADAGKRLFGEAMERLRLAETILGLVGELKPLLEAPLMGWARGNLDDMERQLASLVHAGFLRQTPADALAQFPRYLKAMILRSERAKRDPPRDQARMLELKPFVDALEEARLQGQAAHPQWSALRWDIEELRVSLFAQELGFRSGISPKKLAQRVASLRG*