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scnpilot_solids1_trim150_scaffold_178_curated_100

Organism: solids_Stenotrophomonas_1

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 2 ASCG 12 / 38
Location: comp(110282..110728)

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent Clp protease ATP-binding subunit ClpX n=4 Tax=Xanthomonas campestris RepID=CLPX_XANC8 similarity UNIREF
DB: UNIREF100
  • Identity: 92.7
  • Coverage: 150.0
  • Bit_score: 267
  • Evalue 8.30e-69
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.4
  • Coverage: 151.0
  • Bit_score: 270
  • Evalue 1.80e-69
clpX; ATP-dependent protease ATP-binding subunit ClpX; K03544 ATP-dependent Clp protease ATP-binding subunit ClpX similarity KEGG
DB: KEGG
  • Identity: 92.7
  • Coverage: 150.0
  • Bit_score: 267
  • Evalue 2.60e-69

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Taxonomy

Stenotrophomonas sp. RIT309 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 447
AGCGAGCGCAAGCAGGAAGTGGGCAAGGTGCTGGCCGAGGTCGAGCCCGAGGACCTGATCAAGTTCGGCCTGATCCCGGAGTTCGTCGGCCGCCTGCCGGTGGTGGCGACCCTGGAGGAGCTGGACGAGACGGCGCTGGTCAGGATCCTGACCGAACCGAAGAACGCCATCACCAAGCAGTTCAAGAAGCTGTTCGAGATGGAGAACGTCGAGCTCGAGTTCCGCCCGGACGCGCTGTCGGCCATCGCCAAGAAGGCGCTCAAGCGCAAGACCGGCGCGCGCGGCCTGCGCACCATCGTCGAGTCGGTGCTGCTGGACACCATGTACGACCTGCCGTCGCAGGAGAACGTGAGCAAGGTGGTGGTGGACGAATCGGTCATCGAGCACAAGTCCGAGCCGTACGTGATCTACCAGACGCCACCGGCCAAGGCCGCATCCGGTGACTGA
PROTEIN sequence
Length: 149
SERKQEVGKVLAEVEPEDLIKFGLIPEFVGRLPVVATLEELDETALVRILTEPKNAITKQFKKLFEMENVELEFRPDALSAIAKKALKRKTGARGLRTIVESVLLDTMYDLPSQENVSKVVVDESVIEHKSEPYVIYQTPPAKAASGD*