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scnpilot_solids1_trim150_scaffold_469_curated_22

Organism: solids_Stenotrophomonas_1

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 2 ASCG 12 / 38
Location: comp(21738..22280)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.8
  • Coverage: 178.0
  • Bit_score: 314
  • Evalue 1.30e-82
rluE; ribosomal large subunit pseudouridine synthase e protein (EC:4.2.1.70); K06181 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20] similarity KEGG
DB: KEGG
  • Identity: 83.7
  • Coverage: 178.0
  • Bit_score: 307
  • Evalue 2.80e-81
ribosomal large subunit pseudouridine synthase E n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00037DA075 similarity UNIREF
DB: UNIREF100
  • Identity: 87.7
  • Coverage: 179.0
  • Bit_score: 321
  • Evalue 5.90e-85

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Taxonomy

Stenotrophomonas rhizophila → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 543
ATGCTCATCGCCTTCAACAAACCCTTCAACGTACTGTGCCAGTTCACCGATCGCAGCCAGCCGCCGCGGGCGACGCTGGCCGGTTTCGGCCTGCCCGGGAACGTGTACCCGGCAGGGCGCCTGGACTACGACAGCGAGGGCCTGCTGCTGCTCACCGACGACGGTGGCCTGGCGCATCGCCTGACCGATCCGCGTCACAAGCAGGACAAGACCTATTGGGTGCAGGTGGAGGGCGTGCCGACCCGGGACATGCTGCAGGCGCTGCGCGACGGGGTGCTGCTCAATGACGGGCCGACGCTGCCGGCGCGGGTGCAGCTGCTGGAGGCGCCGCCTGCGCTGTGGCCACGCGATCCGCCGGTGCGGTTCCGCAAGACCGTGCCCGACGCCTGGCTGGCGATCACCCTGCGCGAAGGACGCAACCGCCAGGTGCGGCGCATGACCGCCGCGGTAGGCCTGCCGACGCTGCGGCTGGTGCGGGCCGCGATGGGCGCGCATGCGCTCGACGGCCTGCAGCCCGGGCAGTGGCGGCTGCTGCAGGGTTAG
PROTEIN sequence
Length: 181
MLIAFNKPFNVLCQFTDRSQPPRATLAGFGLPGNVYPAGRLDYDSEGLLLLTDDGGLAHRLTDPRHKQDKTYWVQVEGVPTRDMLQALRDGVLLNDGPTLPARVQLLEAPPALWPRDPPVRFRKTVPDAWLAITLREGRNRQVRRMTAAVGLPTLRLVRAAMGAHALDGLQPGQWRLLQG*