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scnpilot_solids1_trim150_scaffold_11041_curated_1

Organism: solids_Stenotrophomonas_1

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 2 ASCG 12 / 38
Location: 3..1988

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.0
  • Coverage: 661.0
  • Bit_score: 1171
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 89.1
  • Coverage: 661.0
  • Bit_score: 1158
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VIT5_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 90.0
  • Coverage: 661.0
  • Bit_score: 1171
  • Evalue 0.0

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Taxonomy

Rhodanobacter fulvus → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1986
CGCGGCCTGATGGCGCGTCCGGACGGCTCGATCATCGAGACCCCGATCAAGGCCAACTTCCGCGAAGGCCTGAACGTGCTGCAGTACTTCAACTCCACCCACGGCGCGCGCAAGGGCCTGGCGGACACGGCGCTGAAGACCGCCAACTCCGGTTACCTCACCCGCCGCCTGGTCGACGTGGCGCAGGATGTGGTGGTCACCATGGACGACTGCGGCACCAGCAATGGCCTGCTCATGCAGCCCATCGTCGAGGGCGGCGACGTGGTCGAGCCGCTGGGCAACCTGGTGCTCGGGCGCGTGGTGGTTGACGACGTCTACGCCCCGGGCGAGGACGACGAGCCGATCGTGGCGACGAACACGCTGCTGAACGAGGCGCTGGTCGAGAAGCTCGACGCCGCCGGCGTGCAGATGGTCAAGGTGCGCTCGCCGATCACCTGCGAGGCGCCGCATGGCGTGTGCAAGCTGTGCTACGGGCGTGACCTGGCTCGTGGCCACCTGGTCAACATGGGCGAGGCGGTCGGCGTGGTCGCCGCGCAATCCATCGGCGAGCCGGGCACCCAGCTGACCATGCGCACGTTCCATATTGGCGGTGCCGCTTCGCGTGCCGCTGCGGTGGACAACGTGGCGGTGAAGACCACCGGTACGCTGAAATACAACAACCTGAAGTCGGTGCATCACAAGCAGGGCCATCTGGTGGCCGTGTCGCGGTCCGGCGAGCTGAGTGTGATCGACTCTGCCGGCCGCGAGCGCGAGCGCTACAAGATTCCCTACGGCGCCACCATCGCGGTCAAGGACGGTGCGCCGGTGAAGCAGGGCCAAATGGTGGCCAACTGGGATCCGCACACCCACCCGATCGTCACCGAGGTGGCCGGCGTGGTGCGCTTCATCGACTTCCAGGATGGTGTCACCGTGCAGAGCCAGATCGACGAGCTCACTGGCCTGGAGTCGGCCGTGGTCATCGATCCGAAGCGGCGCGGCACCCAGGCCAAGGACCTGCGCCCGATCGTGCGCCTGGAAGACGCCAAGGGTCGGGAGCTGAAGCTGCCCGGGACCGACATTGCCGCGCAGTATTTCCTGCCGGCCGGAGCCATCGTCTCGATCCAGAACGGTGCCCAGGTGGGCGTCGGCGACGTCGTCGCGCGCATCCCGCAGGCATCGTCCAAGACGCGTGACATCACCGGCGGCCTGCCGCGCGTGGCCGACTTGTTCGAGGCGCGCAAGCCAAAGGAGCCGGCGATCCTGGCCGAGCGCTCGGGCATCGTCAGCTTCGGCAAGGACACCAAGGGCAAGCAGCGCCTGGTGATCAGGGACGTGGACGGCAACGAGCACGAGGAGCTGATCCCGAAATGGCGTCAGGTCATCGTGTTCGAGGGCGAGCACGTGGAGAAGGGCGAAACCGTCGTGGACGGCGAGCCGAGTCCGCACGACATCCTGCGCCTGCTGGGTGTCGGTCCGTTGGCCTCCTACCTGGTCAAGGAAATCCAGGACGTGTACCGCCTGCAGGGCGTGAAGATCAATGACAAGCACATCGAGGCGATCATTCGCCAGATGTTGCGCAAGGTCGAGATCACCGACCCGGGCGACAGTCATTACCTGCATGGCGAACAGGTGGAGCGTACGCGGATCAATACGGAAAATGCGACAGCCATCGCCAAGGACGAGCGGCCGGCCGAATACCAGTCGGTGCTGCTTGGCATCACCAAGGCGTCGCTGGCCACGGAGTCGTTCATCTCGGCCGCCTCGTTCCAGGAAACCACCCGCGTGCTCACCGAGGCGGCGGTCCGCGGCACCCGCGATACCTTGCGTGGCCTGAAGGAAAATGTTATCGTTGGCCGGTTAATCCCGGCGGGCACGGGGCTGGCCTACCACATGGCACGTCGCCGTCAGGATGGCTTGACCGCCGCGGAACTGGACACGCTTGCAGGCGGCACACCGGCAGCGACCGTGGTCGAAGATCCGGTCACCGACATCAACGATGCGGAGTAG
PROTEIN sequence
Length: 662
RGLMARPDGSIIETPIKANFREGLNVLQYFNSTHGARKGLADTALKTANSGYLTRRLVDVAQDVVVTMDDCGTSNGLLMQPIVEGGDVVEPLGNLVLGRVVVDDVYAPGEDDEPIVATNTLLNEALVEKLDAAGVQMVKVRSPITCEAPHGVCKLCYGRDLARGHLVNMGEAVGVVAAQSIGEPGTQLTMRTFHIGGAASRAAAVDNVAVKTTGTLKYNNLKSVHHKQGHLVAVSRSGELSVIDSAGRERERYKIPYGATIAVKDGAPVKQGQMVANWDPHTHPIVTEVAGVVRFIDFQDGVTVQSQIDELTGLESAVVIDPKRRGTQAKDLRPIVRLEDAKGRELKLPGTDIAAQYFLPAGAIVSIQNGAQVGVGDVVARIPQASSKTRDITGGLPRVADLFEARKPKEPAILAERSGIVSFGKDTKGKQRLVIRDVDGNEHEELIPKWRQVIVFEGEHVEKGETVVDGEPSPHDILRLLGVGPLASYLVKEIQDVYRLQGVKINDKHIEAIIRQMLRKVEITDPGDSHYLHGEQVERTRINTENATAIAKDERPAEYQSVLLGITKASLATESFISAASFQETTRVLTEAAVRGTRDTLRGLKENVIVGRLIPAGTGLAYHMARRRQDGLTAAELDTLAGGTPAATVVEDPVTDINDAE*