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scnpilot_solids1_trim150_scaffold_314_curated_51

Organism: solids_Stenotrophomonas_1

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 2 ASCG 12 / 38
Location: 53463..53762

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit omega (EC:2.7.7.6); K03060 DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 99.0
  • Coverage: 99.0
  • Bit_score: 190
  • Evalue 3.60e-46
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Steno similarity UNIPROT
DB: UniProtKB
  • Identity: 99.0
  • Coverage: 99.0
  • Bit_score: 190
  • Evalue 1.60e-45
DNA-directed RNA polymerase subunit omega n=11 Tax=Stenotrophomonas RepID=RPOZ_STRM5 similarity UNIREF
DB: UNIREF100
  • Identity: 99.0
  • Coverage: 99.0
  • Bit_score: 190
  • Evalue 1.10e-45

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Taxonomy

Stenotrophomonas sp. RIT309 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 300
ATGGCCCGCATTACCGTAGAAGATTGCCTGGAAGTCGTTAACAACCGTTTCGAGCTGGTCATGATGGCGTCCAAGCGCGCCCGTCAGCTGGCCAACGGCGTGCAGGCCACCCTCGACAACAGCGAGACCGAGGACAAGCCGACCGTGCTGGCGCTGCGCGAGATCGCCGCCCGCAAGATCGACAACGCCCTGATCGAGGAAGTCGAGAAGGCCGAGCGCGAGCGTGCCGAGCGCGAGGCGCTGGAATGGGCCGCCGCCGAAGTCGTCGCCGACGAGGACATGTCCAAGAACGACGACTGA
PROTEIN sequence
Length: 100
MARITVEDCLEVVNNRFELVMMASKRARQLANGVQATLDNSETEDKPTVLALREIAARKIDNALIEEVEKAERERAEREALEWAAAEVVADEDMSKNDD*