ggKbase home page

scnpilot_solids1_trim150_scaffold_794_curated_17

Organism: solids_Stenotrophomonas_1

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 2 ASCG 12 / 38
Location: 19417..21312

Top 3 Functional Annotations

Value Algorithm Source
HsdR family type I site-specific deoxyribonuclease n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S4M1_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 95.7
  • Coverage: 632.0
  • Bit_score: 1189
  • Evalue 0.0
HsdR family type I site-specific deoxyribonuclease {ECO:0000313|EMBL:AGH49429.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.7
  • Coverage: 632.0
  • Bit_score: 1189
  • Evalue 0.0
HsdR family type I site-specific deoxyribonuclease similarity KEGG
DB: KEGG
  • Identity: 95.7
  • Coverage: 632.0
  • Bit_score: 1189
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingomonas sp. MM-1 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1896
ATGGCCTTTTTGTCCGAAGCCCAAGTCGAACAAGCCTTGCTAGAACAACTGCGCAGGCTGGGCTACGCGGTTGCATCTGATGAGGTCATCAGCCCGGACGGCAGCGCGCCGGAGCGCGAAAGCCACGATGTCGTATTCCTATACCAACGGCTGGCAGATGCCGTTCTGCACCTCAATCCCCACCTACCGCCGGAAGCACGGGCGGATGCCATCCGCAAGCTGTCCCAATCCGTATTTCCCGCTTTGCTGGAAGAAAACCGCCGTATCCACACTCTGCTGACCGAGGGCGTGGACGTGGAATACTACGGCGGCGATGGCGTGCTGACGGCAGGCAAGGTGGCGTTGCTGGATTTCGACGCGCCTGCGCGCAACGACTGGCTAGCTGTGCCGCAGTTCGTGGTCATCCACGGCCAGGTCAAGCGCAGGCCGGACGTAGTGCTGTTCGTCAACGGTTTGCCGCTTGCAGTGATCGAGCTGAAGGCGCCGGGCAGCGCGGGCGCGCACCTGGCGGGCGCGTTCAACCAGTTGCAGACATACAAGCAGCAGATTCCAGCGCTGTTTCACACCAATGCGCTGCTGGTCACGTCTGATGGCATCGCGGCGCGCGTGGGGTCGCTGTCGGCCGATCTGGAACGCTTCATGCCGTGGCGCACCACGGATGGCAAGGCCATTCTGCAAAAGGGCTTACCGGAACTGCCGACTCTGATCGAGGGCGTGTTCGAGAAGCAACGGTTCCTCGATGTGCTGCGCCACTTCACCGTATTCGGCGAAATCGGCAGCGGCCTGGCGAAGATCGTGGCAGGCTATCACCAGTACCACGCAGTCAACCGCGCCATCGAGTCCACGATTCGCGCCTCCGACCCACGGCAGGGCGTGGCCGAGGAACCGGCGTCCTACGGGCTGCCCAGCGTGGCGACGCAACCCCAGGGCGACAGGCGTGCGGGGGTGATCTGGCATACGCAAGGTTCCGGTAAGAGTCTGCTGATGGCCTTCTACGCCGGGCGACTGGTGAAACACCCAGCGATGGAGAACCCGACGCTTGTCGTGCTAACCGACCGCAACGACCTGGACGACCAGTTGTTCGCCACCTTCTCGATGTGCCGCGACCTGATCCGCCAGACACCGGTGCAGGCCGAAAGCCGCGAGCATTTACAGCAACTGCTTGCCAGGGCTTCGGGTGGCGTGATCTTCACCACCTTGCAGAAATTCGGAGAGGTGAACGCGCCGCTGACCACACGCCGCAACGTAGTGGTCATTGCTGATGAGGCGCACCGTTCGCAATACGGCTTTCGGGCGAAGGTGGATGCCAAGACCGGCGAGGTCTCCTACGGATTCGCCAAACACTTGCGCGACGCGCTGCCCAATGCCTCTTTCATCGGTTTCACGGGTACGCCTATCGAGGCGACGGATGTGAACACTCCGGCCGTGTTCGGCAATTACATTGACATCTACGACATCAGCCGCGCGGTGGAGGACGGCGCGACGGTTCCGATCTACTACGAATCGCGGCTGGCGCGCATCGAACTGGATGAGGACGAGAAGCCCAAGCTCGATGCTGAGGTGGAAGCGCTGACCGAGGACGAGGCAGTCACCGAACAGGAAAAGCTGAAGGCGAAATGGGCGACAGTCGAACAACTGGTCGGCAGCGAAAAGCGCGTCGCGCTGGTGGCGAAGGACTTAGTGGCGCACTTTGAGGACAGGCTGGCCGCGCTGGATGGCAAGGCGATGGTGGTGTGCATGAGCCGCCGCATCTGCGTGGCGCTGTATAACGAGATCGTCAAGTTGCGCCCGGGCTGGCACAGCACCGATGACAATGCGGGAGCCATCAAAATCGTGATGACGGGCGCAGCCAGCGACCCACCCGAATGGCAGCAGCACATCGGCAACAAGGCGCGA
PROTEIN sequence
Length: 632
MAFLSEAQVEQALLEQLRRLGYAVASDEVISPDGSAPERESHDVVFLYQRLADAVLHLNPHLPPEARADAIRKLSQSVFPALLEENRRIHTLLTEGVDVEYYGGDGVLTAGKVALLDFDAPARNDWLAVPQFVVIHGQVKRRPDVVLFVNGLPLAVIELKAPGSAGAHLAGAFNQLQTYKQQIPALFHTNALLVTSDGIAARVGSLSADLERFMPWRTTDGKAILQKGLPELPTLIEGVFEKQRFLDVLRHFTVFGEIGSGLAKIVAGYHQYHAVNRAIESTIRASDPRQGVAEEPASYGLPSVATQPQGDRRAGVIWHTQGSGKSLLMAFYAGRLVKHPAMENPTLVVLTDRNDLDDQLFATFSMCRDLIRQTPVQAESREHLQQLLARASGGVIFTTLQKFGEVNAPLTTRRNVVVIADEAHRSQYGFRAKVDAKTGEVSYGFAKHLRDALPNASFIGFTGTPIEATDVNTPAVFGNYIDIYDISRAVEDGATVPIYYESRLARIELDEDEKPKLDAEVEALTEDEAVTEQEKLKAKWATVEQLVGSEKRVALVAKDLVAHFEDRLAALDGKAMVVCMSRRICVALYNEIVKLRPGWHSTDDNAGAIKIVMTGAASDPPEWQQHIGNKAR