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scnpilot_solids1_trim150_scaffold_255_curated_18

Organism: solids_Stenotrophomonas_1

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 2 ASCG 12 / 38
Location: comp(21209..22465)

Top 3 Functional Annotations

Value Algorithm Source
RNA helicase n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI00037855EE similarity UNIREF
DB: UNIREF100
  • Identity: 62.8
  • Coverage: 425.0
  • Bit_score: 473
  • Evalue 2.10e-130
RNA helicase {ECO:0000313|EMBL:AJC46963.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.6
  • Coverage: 425.0
  • Bit_score: 472
  • Evalue 6.70e-130
DEAD/DEAH box helicase similarity KEGG
DB: KEGG
  • Identity: 58.6
  • Coverage: 418.0
  • Bit_score: 447
  • Evalue 4.00e-123

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Taxonomy

Xanthomonas sacchari → Xanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1257
ATGCCCTTTTCCCGACTCGGCCTGTCTCCCTACGTACTGCCCGCGCTGGCACGCGCGCTGCGGCAGGCCGGCTACGGCGCCCCCACGCCGATCCAGCAGCAGGCGGTGCCGGTGCTGCTGCAGGGCCGGGACGTGGTGGCGCTGGCCCCGACCGGTTCGGGCAAGACCGCCGCCTACGTGCTGCCGGCGCTGCAGCGGTTCGCCATGACCACGGCGCGCAGGCCGCGGGAGCTGCGGCAACTGGTACTGGTGCCCACGCGCGAGCTGGCGCTGCAGGTGGCCGACGTGTTCGCCACGCTCGGCCGGGAGCTGCCGCGGCAACCGCGGGTGGTGTGCGCGGTGGGCGGGGTGTCGATCAATCCGCAGATGATGGCGCTGCGCGGTGGGGCCGACGTGGTGGTGGCCACGCCCGGGCGCCTGCTCGATCTGCTGGCGCACAACGCGTTGTCGCTGCGCCAGGTGCAGCTGCTGGTGCTGGACGAGGCCGACCGGCTGCTGGAGCTGGGCTTCGGCGACGAGGTGCGGCGGATCCTTGCCGGACTGCCCGCGCAGCGGCAGACGGCGTTGTTCTCGGCCACCTTCCCCGACCAGATCGAGGCATTGGCGGCGGCCGGCCTGCGCGCGCCCGCGCGCCTGCAGGTCGATGCGCAGGCGCCCGCGCAGATCGAGCAGCGCGCGCTGCGGGTCGATGGCGAGCGCCGCGTCGAACTGCTGCTGTCGCTGCTGCGCGATCCGCGCTGGCGGCAGGTGCTGGTGTTCGTCGCCAGCATCCGCGAGGGCGACCGCCTGGCCGGCGCGCTGCGCGGGCAGGGCATCGCCGCGCAGGCGCTGCATGGCGACCTGTCGCAGGGCCGCCGCGTGCGCACCCTGCAGGCGTTCAAGGAGGGCCAGCTGCAGGTGCTGGTGGCGACCGACGTGGCCGCGCGCGGCATCGACATCGCCGGCCTGCCGGTGGTGGTGAACCATGCGTTGCCGCGTTCGCCGGCCGATTACCTGCACCGCATCGGCCGCACCGGCCGTGCCGGCAGCCCCGGACTGGCGGTGAGCCTGGTCGAGGCCGCGGCGCTGGCGCACTGGCGGTTGATCTGCAGGCGCCATGGCCTGCGCCTGGAGCCGGAGGTGGTGTCGGGTTTCGAGCCGACCGGGGCGGCACCGGCCGCAGCGCCGGCAGGCGATGGCAAAGGCGGCATCAAGGGGCGCCGGCCGAGCCGGAAGGACCGGCTGCGCGCCGCGGCGGCGGGCACGCCGGCCGGTTGA
PROTEIN sequence
Length: 419
MPFSRLGLSPYVLPALARALRQAGYGAPTPIQQQAVPVLLQGRDVVALAPTGSGKTAAYVLPALQRFAMTTARRPRELRQLVLVPTRELALQVADVFATLGRELPRQPRVVCAVGGVSINPQMMALRGGADVVVATPGRLLDLLAHNALSLRQVQLLVLDEADRLLELGFGDEVRRILAGLPAQRQTALFSATFPDQIEALAAAGLRAPARLQVDAQAPAQIEQRALRVDGERRVELLLSLLRDPRWRQVLVFVASIREGDRLAGALRGQGIAAQALHGDLSQGRRVRTLQAFKEGQLQVLVATDVAARGIDIAGLPVVVNHALPRSPADYLHRIGRTGRAGSPGLAVSLVEAAALAHWRLICRRHGLRLEPEVVSGFEPTGAAPAAAPAGDGKGGIKGRRPSRKDRLRAAAAGTPAG*