ggKbase home page

scnpilot_solids1_trim150_scaffold_393_curated_10

Organism: solids_Stenotrophomonas_1

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 2 ASCG 12 / 38
Location: comp(22957..23988)

Top 3 Functional Annotations

Value Algorithm Source
DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1] similarity KEGG
DB: KEGG
  • Identity: 54.7
  • Coverage: 320.0
  • Bit_score: 355
  • Evalue 2.20e-95
ATP-dependent DNA ligase n=1 Tax=Xanthomonas sp. M97 RepID=UPI0003A8F079 similarity UNIREF
DB: UNIREF100
  • Identity: 54.8
  • Coverage: 334.0
  • Bit_score: 368
  • Evalue 6.10e-99
Putative DNA ligase family protein {ECO:0000313|EMBL:EIL99286.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.0
  • Coverage: 307.0
  • Bit_score: 366
  • Evalue 5.50e-98

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1032
ATGCGGCAGGTGTGGTTCAGGACCCTGTGGGGCGGCATGAGCGTGGCCGTTCCGGGTGCGACGGAGCCGGATCCAACCGGGGATAGAGGCATGCCAGGTACACGACAAAACGCGTCGTCCGCCGCCAAGGCCGGGCCCACGGTGCTGACCAGCCCTGGCCGCGTGGTGTATCCGGACGCCGGCATTCGCAAGCAGGATGTGTTCGCCTACTACCGCACCATGCTGCCGTGGCTGCTGCCGGAGATCGCCGGCCGGCCGTTGTCCGTCGTGCGTTGCCCGCAGGGGGCCGGGCGGCCATGTTTCTTCCAGAAGCACCTGCCGGCCGGCATGCAACATGTAGCCGCGGTCCCGATAGGGGAGCAGAACGGTGCCAACGCCGACTACATCGTGGTGCGCGATGCGGCGGGGCTGTTCGAACTGGTGCAGTTCAACGCGCTTGAGTTCCATCCCTGGGGCGCACGCGCCGATACGCCCGACCAGGCCGACCGCATGGTGTTCGATCTCGATCCTGGCGCTGGCGTGCCCTGGGCACGGGTGATCGCGGCGGCGCGACAGGTGCGCAGGCGCCTGCGTGGAGTCGGCCTCACGTCCTTCGTGCGCACGTCCGGTGGCAAGGGCCTGCACGTGGTGGTGCCGCTGCGACCGGCATGTCCGTGGCCGCAGGTGAAGGCATTCGCGCGCACGTTGGCCGAATCCATGGCGGCGGCTGATCCCTTGGCGTACGTGGCCACCGCGAGCAAGCGCCTGCGCACCGGGCGCATCTTCATCGACTACCTGCGCAATGGCCGCGGCGCTACCAGCGTGGCGTCGTTCTCGTTGCGTGCCCGGCCGGGCGCGCCGGTGGCGATGCCGCTGCGCTGGGAAGAGCTGGCCAGGGTACGGCGTGGCGACGCCTACGACATCATCTCGGCACCGCGACGCATGACGCGGATGAGGCGCCATCCCTGGGGCGACGTCGACCGGATCCACCAGGATCTGGCCCATGTCGCAGCCTGCCGGGCCGGGCGCAAGCCGCCGAAGCGGGAGGCATGA
PROTEIN sequence
Length: 344
MRQVWFRTLWGGMSVAVPGATEPDPTGDRGMPGTRQNASSAAKAGPTVLTSPGRVVYPDAGIRKQDVFAYYRTMLPWLLPEIAGRPLSVVRCPQGAGRPCFFQKHLPAGMQHVAAVPIGEQNGANADYIVVRDAAGLFELVQFNALEFHPWGARADTPDQADRMVFDLDPGAGVPWARVIAAARQVRRRLRGVGLTSFVRTSGGKGLHVVVPLRPACPWPQVKAFARTLAESMAAADPLAYVATASKRLRTGRIFIDYLRNGRGATSVASFSLRARPGAPVAMPLRWEELARVRRGDAYDIISAPRRMTRMRRHPWGDVDRIHQDLAHVAACRAGRKPPKREA*