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scnpilot_solids1_trim150_scaffold_393_curated_63

Organism: solids_Stenotrophomonas_1

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 2 ASCG 12 / 38
Location: comp(74499..74708)

Top 3 Functional Annotations

Value Algorithm Source
Major cold shock protein n=6 Tax=Xanthomonas RepID=G2LVD1_9XANT similarity UNIREF
DB: UNIREF100
  • Identity: 97.1
  • Coverage: 69.0
  • Bit_score: 140
  • Evalue 5.50e-31
Cold-shock protein {ECO:0000313|EMBL:AJC45051.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.1
  • Coverage: 69.0
  • Bit_score: 141
  • Evalue 5.90e-31
cspA; Cold shock protein CspA; K03704 cold shock protein (beta-ribbon, CspA family) similarity KEGG
DB: KEGG
  • Identity: 95.7
  • Coverage: 69.0
  • Bit_score: 140
  • Evalue 1.70e-31

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Taxonomy

Xanthomonas sacchari → Xanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 210
ATGTCTGAGCGTCAGACCGGCACGGTGAAGTGGTTCAACGATGCCAAGGGTTTTGGTTTCATCACCCCGGAAAGCGGCCCCGACCTGTTCGTGCACTTCCGTGCCATCCAGGGCACCGGCTTCAAGTCGCTGCAGGAAGGCCAGAAGGTGACCTTCGTCGCCGTGCAGGGCCAGAAGGGCATGCAGGCTGACCAGGTGCAGGCGCTGTAA
PROTEIN sequence
Length: 70
MSERQTGTVKWFNDAKGFGFITPESGPDLFVHFRAIQGTGFKSLQEGQKVTFVAVQGQKGMQADQVQAL*