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scnpilot_solids1_trim150_scaffold_326_curated_13

Organism: solids_Stenotrophomonas_1

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 2 ASCG 12 / 38
Location: comp(20215..20949)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.0
  • Coverage: 244.0
  • Bit_score: 392
  • Evalue 5.10e-106
rsmE; Ribosomal RNA small subunit methyltransferase E (EC:2.1.1.-); K09761 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] similarity KEGG
DB: KEGG
  • Identity: 82.8
  • Coverage: 244.0
  • Bit_score: 390
  • Evalue 3.40e-106
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KRR0_STEMA similarity UNIREF
DB: UNIREF100
  • Identity: 82.8
  • Coverage: 244.0
  • Bit_score: 390
  • Evalue 1.10e-105

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Taxonomy

Stenotrophomonas sp. RIT309 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 735
ATGCGCCTGACCCGCTGCCCCGTGGCGCTGCCGCTGCAGCCCGGGCAGACCCTGGCGCTGCCCGAGGACGCCGCCAACCACCTGGTACGGGTGATGCGCCTGCGCGAGGGCGATGCCTGCGTGCTGTTCAACGGCGACGGCAGCGACTACGCGGCAACGCTGCTGGCGGTGGGCAAGCGCGAGGTGCAGGTACGCATCGACGCCGCACGCGCGCTGGACAACGAATCGCCGCTGGCCATCACCCTGCTGCAGGGCATCGCCCGCGGCGAGAAGATGGACCTGATCCTGCAGAAGGCCACCGAGCTGGGCGTGACCGCCATCATCCCGGTGAACGCCGAGCGCACCGAAGTGAAGCTGGATGCCGCACGTGCCGAGAAGCGCCTCGCGCACTGGCGCAGCGTGGTCGGCGCGGCCTGCGGCCAATCCGGCCGCGCCCGCATTCCGGCGCTGTCGCCCCCGCAGGCGCTGGCCGCGGCGGCGGCGGCGTTGCCTGCGCAGAGCCTGCGCCTGACCCTGGATCCCCTGGGCGAGCATCGCCTGTCCGCGCTGCCGCCCGCGCCGGCGGGCGGCGTGGTGATCGCCATCGGTCCGGAAGGCGGCTGGTCGCCGCGCGACCGCCAGCAACTGGGCGATGCCGGCTTCCAGGGGTTGCAGCTGGGACCGCGCATCCTGCGCACCGAGACCGCGGGCCTGGCCGCGATCGCGGCATTGCAGGCACGGCTGGGCGACCTGTAG
PROTEIN sequence
Length: 245
MRLTRCPVALPLQPGQTLALPEDAANHLVRVMRLREGDACVLFNGDGSDYAATLLAVGKREVQVRIDAARALDNESPLAITLLQGIARGEKMDLILQKATELGVTAIIPVNAERTEVKLDAARAEKRLAHWRSVVGAACGQSGRARIPALSPPQALAAAAAALPAQSLRLTLDPLGEHRLSALPPAPAGGVVIAIGPEGGWSPRDRQQLGDAGFQGLQLGPRILRTETAGLAAIAALQARLGDL*