ggKbase home page

scnpilot_solids1_trim150_scaffold_32743_curated_1

Organism: solids_Truepera_1

near complete RP 48 / 55 BSCG 46 / 51 ASCG 11 / 38 MC: 1
Location: comp(2..721)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A; K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] similarity KEGG
DB: KEGG
  • Identity: 60.3
  • Coverage: 232.0
  • Bit_score: 259
  • Evalue 1.50e-66
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 /; RQ-24).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.3
  • Coverage: 232.0
  • Bit_score: 259
  • Evalue 6.70e-66
tRNA pseudouridine synthase A n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CU58_TRURR similarity UNIREF
DB: UNIREF100
  • Identity: 60.3
  • Coverage: 232.0
  • Bit_score: 259
  • Evalue 4.80e-66

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Truepera radiovictrix → Truepera → Deinococcales → Deinococci → Deinococcus-Thermus → Bacteria

Sequences

DNA sequence
Length: 720
GTGGCGCCGCAAGACGCAACCGTTTCTGTGAGGCGGCGCCTGCGGCTCACGCTCGAGTTCGACGGCACCGACTTCTACGGTTGGCAGCGCCAAGCGCACGGTGAGCGCACCGTTCAGGCCACCCTAGAGGCGGCGTTCGCTGCCCTCCCAGGCGACCATTCCGCCGTCCTGGCGGCGGGCCGCACCGACGCTGGGGTGCATGCGCTCGCGATGGTCGCGCACGTGGACACGACCTCGACCATCCCGGAAGCCAAGTTGCGCCTCGCCCTCAACGCCCACCTGCCTGCCGACGTTGCCGTCACCGCGCTGTCGGCGGCAGCACCAGACTTCGAGGCGCAGTTCGACTGCCTCTACCGCCGTTACCTCTACCGCATGCGGGTCACGCGGGACGACCCGCGGGCGATGGCCATCCAACGTGACAGGCTGCTGGCCGTGCATTGGCGCCCCGACATCGCCGCCATGCAAGCTGCGACCGAGCACCTCCTTGGCACTCACGACTTCGCTAGCTTCGCTACCCAGGAGACGCGCACGACGGTGCGCACCGTTCACTTGTGTGACCTGCGCGAGGAGCGCGGCGAGGTGCGCCTGCACATCGCGGCTGACGGCTTCCTGCGCAACATGGTGAGGACGGTCGTCGGCACGCTGTTATGGGTAGGGCGCGGCAAGCTGCGCCCAGACGACCTGCCGGGCGTGCTCGAGGCCAGAGACAGGCAACGCGCC
PROTEIN sequence
Length: 240
VAPQDATVSVRRRLRLTLEFDGTDFYGWQRQAHGERTVQATLEAAFAALPGDHSAVLAAGRTDAGVHALAMVAHVDTTSTIPEAKLRLALNAHLPADVAVTALSAAAPDFEAQFDCLYRRYLYRMRVTRDDPRAMAIQRDRLLAVHWRPDIAAMQAATEHLLGTHDFASFATQETRTTVRTVHLCDLREERGEVRLHIAADGFLRNMVRTVVGTLLWVGRGKLRPDDLPGVLEARDRQRA