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scnpilot_solids1_trim150_scaffold_21594_curated_2

Organism: solids_Truepera_1

near complete RP 48 / 55 BSCG 46 / 51 ASCG 11 / 38 MC: 1
Location: comp(639..1661)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CWA1_TRURR similarity UNIREF
DB: UNIREF100
  • Identity: 78.3
  • Coverage: 350.0
  • Bit_score: 541
  • Evalue 5.20e-151
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor similarity KEGG
DB: KEGG
  • Identity: 78.3
  • Coverage: 350.0
  • Bit_score: 541
  • Evalue 1.60e-151
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 /; RQ-24).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.3
  • Coverage: 350.0
  • Bit_score: 541
  • Evalue 7.30e-151

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Taxonomy

Truepera radiovictrix → Truepera → Deinococcales → Deinococci → Deinococcus-Thermus → Bacteria

Sequences

DNA sequence
Length: 1023
GACGAAGACCTCGACGACGACGAGCTCGAAGAAGAGTCAGACGACGAGATGGATCGCGAGGAACTTGAGGCCCGCGCCGAGGCCATGGCCGATGCGCGCCCCAAGACCAACGACCCAGTTAGGCAGTACCTGCAGGAGATCGGCCGCGTGAAGCTCCTTACGCTTGACGAGGAGATCGACCTCGCGAGGCGCATCGAGGACGGCGAGGCGTCGCGCGCCATCCTCGCGGAGTGGAACGACGACGGCGAGGAGCGCCAACGTCGGCGCCACCAGCGCATCGTCGAGGACGGCGACCTCGCCCGCAAGCACCTCATCGAGGCTAACTTGCGCTTGGTCGTTAGCATCGCCAAGAAGTACAACGGCCGCGGCATGAGCTTCCTCGACCTCATCCAAGAGGGCAACCAGGGCCTCATTCGCGCCGTCGAGAAGTTCGAGTACCGCAGGCGCTACAAGTTCTCCACCTACGCAACGTGGTGGATCAGGCAGGCCATCAACCGCGCCATCGCCGATCAGTCGCGCACCATCCGCATACCCGTGCACATGGTCGAGACCATCAACAAGCTCACGCGCGCCAGCCGCCGCCTGCAGCAGGAACTCTCGCGCGAACCAACTTTCGCCGAGATAGCAGACGCCATGGGCCCCGACTGGAACGCTGAGAAGGTCGAGGAGGCGTTCAAGCTCACGCGTGAACCGTTCTCCCTCGAGACCCCGATCGGCGACGAGGAAGATAGCTTCTACGGCGATTTCATCCCGGACGAGAACATCGAGTCGCCCGTCGATGAGGCCTCCAAGAACATCCTCAGCGAGGAACTCGACGAGGCGCTCAACAAGCTGAACGAGCGCGAGGCGATGGTCCTCAAGCTCCGCAAGGGCCTGGTCGACGGTCGCGAGCACACGCTCGAGGAAGTGGGAAGCCACTTCGGCGTGACTCGCGAACGCATCCGCCAGATCGAGAACAAGGCGCTCCGCAAGCTCAAGTACCACGAGAGCCGCACCCGTAAATTGCGGGACTTCCTCGACTGA
PROTEIN sequence
Length: 341
DEDLDDDELEEESDDEMDREELEARAEAMADARPKTNDPVRQYLQEIGRVKLLTLDEEIDLARRIEDGEASRAILAEWNDDGEERQRRRHQRIVEDGDLARKHLIEANLRLVVSIAKKYNGRGMSFLDLIQEGNQGLIRAVEKFEYRRRYKFSTYATWWIRQAINRAIADQSRTIRIPVHMVETINKLTRASRRLQQELSREPTFAEIADAMGPDWNAEKVEEAFKLTREPFSLETPIGDEEDSFYGDFIPDENIESPVDEASKNILSEELDEALNKLNEREAMVLKLRKGLVDGREHTLEEVGSHFGVTRERIRQIENKALRKLKYHESRTRKLRDFLD*