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scnpilot_solids1_trim150_scaffold_1688_curated_7

Organism: solids_Xanthomonadales_2

partial RP 17 / 55 MC: 2 BSCG 18 / 51 MC: 2 ASCG 7 / 38
Location: 8172..8840

Top 3 Functional Annotations

Value Algorithm Source
Bacterial regulatory helix-turn-helix , LysR family protein n=1 Tax=Xanthomonas axonopodis pv. punicae str. LMG 859 RepID=H1XGF7_9XANT similarity UNIREF
DB: UNIREF100
  • Identity: 80.6
  • Coverage: 222.0
  • Bit_score: 363
  • Evalue 1.30e-97
transcriptional regulator, LysR family similarity KEGG
DB: KEGG
  • Identity: 80.2
  • Coverage: 222.0
  • Bit_score: 363
  • Evalue 5.20e-98
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 83.9
  • Coverage: 223.0
  • Bit_score: 373
  • Evalue 1.70e-100

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Taxonomy

RIFOXYA1_FULL_Xanthomonadales_69_10_curated → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 669
GTGCGCGGACTGGACGCCGGCGAGCTGAACGTGGCCGCCGGCAGCTCCACCATCCTGTACCTGCTGCCGGGCATCGTCGATGCGTTCCGCCAGCGCCACCCGGACGTGCGCCTGAGCCTGCACAACGTCACCGGCGCCAGCGGCCTGGACCTGCTGCGCAGCGATGCCGTGGACCTGGCCGTGGGCTCGATGCTGGACGTGCCGGCCGACCTGACCTACGCGCCGGTGTACCGCTTCGAGCCGATGCTGATCACCCCGCCCGACCACCCGCTGGCAAGCAAGCGCGAGTTGTCACTGGAGGACCTGTCGCCTTACGGGCTGATCCTGCCGCCCAAGCGCCTGACCACCTACCGGCTGGTCGACCTGGTGTTCCAGCAGAACCGGGTGCCGTACACGGTTGCACTGGAAGTGGGCGGCTGGGAGGTCATCAAGCAGTACGTGGCGATGGGCCTGGGCATCAGCATTGTCACCGCGATCTGCCTGACCGAGGCCGACCGCCAGCGGCTGGCGGCACGCTCGCTGGCGCGCTGGTTCCCGTCGCGCAGCTACGGCATCGTGATGCGCAAGGGCAAGTTCCTGTCAGCGCAGGCCCGCGCCTTCGTCGAGCTGATCCAACCGGAGGTGCTCACGCCGCGCGGCTACGACGAGAGCGGGCATTCGGAGCGCTGA
PROTEIN sequence
Length: 223
VRGLDAGELNVAAGSSTILYLLPGIVDAFRQRHPDVRLSLHNVTGASGLDLLRSDAVDLAVGSMLDVPADLTYAPVYRFEPMLITPPDHPLASKRELSLEDLSPYGLILPPKRLTTYRLVDLVFQQNRVPYTVALEVGGWEVIKQYVAMGLGISIVTAICLTEADRQRLAARSLARWFPSRSYGIVMRKGKFLSAQARAFVELIQPEVLTPRGYDESGHSER*