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scnpilot_solids1_trim150_scaffold_2011_curated_2

Organism: solids_Xanthomonadales_2

partial RP 17 / 55 MC: 2 BSCG 18 / 51 MC: 2 ASCG 7 / 38
Location: 223..1071

Top 3 Functional Annotations

Value Algorithm Source
diaminopimelate epimerase; K01778 diaminopimelate epimerase [EC:5.1.1.7] similarity KEGG
DB: KEGG
  • Identity: 71.3
  • Coverage: 275.0
  • Bit_score: 384
  • Evalue 2.10e-104
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.3
  • Coverage: 275.0
  • Bit_score: 384
  • Evalue 9.50e-104
Diaminopimelate epimerase n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WPE0_PSEUU similarity UNIREF
DB: UNIREF100
  • Identity: 71.3
  • Coverage: 275.0
  • Bit_score: 384
  • Evalue 6.80e-104

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Taxonomy

Pseudoxanthomonas suwonensis → Pseudoxanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 849
ATGCGTTTCACCAAGATGCACGGTGCCGGCAACGACTTCGTCGTGCTGGACCTGCGCGGCGGCCTGCCTGTGCCCACGCCCGCGCTGTGCGCGCGCCTGGGCGACCGCCATTTCGGCGTCGGCTGCGACCAGATCCTGACCATCGAGCCGCCGCGCAATGCCGGCAGCATCGCCGCCTATCGCATCTGGAACGCCGATGGTTCGGCCTCCGGCCAGTGCGGCAACGGCGCGCGCTGCGTCGCCGCCTGGCTGGTGCGCGATGGCGCTGCGCCCGCGGATGCCGGCTTCGCCATCGAAAGCCCGGCCGGCGTGCATCTGGTGCGGCATGACGGCGTGGGCGGCTTCATCATCGACATGGGCGCGCCGCGCTTCGCACCGGCCGATATCCCGCTGGCCGGCGTCGACGGCGAACACGCCGAATACACGCTCGCCATCGACGGCGAAACCCTGTGCTTCGGCGCGGTGTCCATGGGGAACCCGCATGCGGTCATCGAGGTCGCCGACGTCGACGCCGCGGATGTCGCCCGCATCGGCCAGGCCGTACAGGCCAGCGCGATGTTCCCGGCGTCGGCCAACGTCGGTTTCGCCCAGGTGCTGGCGCCGGACCGCATCCGCCTGCGCGTGTTCGAGCGCGGCGTCGGCGAGACGCTGGCCTGTGGCAGCGGCGCCTGCGCGGCGGTGGCGGTGTTGGCGCGGCGCGGCCGCGTGCAGGCGGATGCCGAGGTGGCGGTGGACCTGCCCGGCGGCACCCTGCGCATCCGCAACGATACCGCCGCCAACAGCGTGTTCATGGCCGGCCCGGCCGCATTCGTGTTCGAAGGCAACCTGCTTTCCCAGGAGCAACCGTGA
PROTEIN sequence
Length: 283
MRFTKMHGAGNDFVVLDLRGGLPVPTPALCARLGDRHFGVGCDQILTIEPPRNAGSIAAYRIWNADGSASGQCGNGARCVAAWLVRDGAAPADAGFAIESPAGVHLVRHDGVGGFIIDMGAPRFAPADIPLAGVDGEHAEYTLAIDGETLCFGAVSMGNPHAVIEVADVDAADVARIGQAVQASAMFPASANVGFAQVLAPDRIRLRVFERGVGETLACGSGACAAVAVLARRGRVQADAEVAVDLPGGTLRIRNDTAANSVFMAGPAAFVFEGNLLSQEQP*