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scnpilot_solids1_trim150_scaffold_1768_curated_3

Organism: solids_Xanthomonadales_2

partial RP 17 / 55 MC: 2 BSCG 18 / 51 MC: 2 ASCG 7 / 38
Location: 1686..1958

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein Hfq n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UR18_PSEUP similarity UNIREF
DB: UNIREF100
  • Identity: 77.4
  • Coverage: 93.0
  • Bit_score: 141
  • Evalue 5.50e-31
hfq; RNA-binding protein Hfq; K03666 host factor-I protein similarity KEGG
DB: KEGG
  • Identity: 77.4
  • Coverage: 93.0
  • Bit_score: 141
  • Evalue 1.70e-31
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 80.0
  • Coverage: 90.0
  • Bit_score: 141
  • Evalue 4.50e-31

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Taxonomy

R_Gammaproteobacteria_63_22 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 273
ATGACGAAGTCGCAGTCCTTGCAGGATCCGTTCCTGAACGCTTTGCGCCGCGAGCGCGTACCGGTGTCCATCTACCTGGTCAACGGCATCAAGCTGCAGGGCACCATCGAGTCCTTCGACCAGTTCGTCATCCTGCTGCGCAACACCGTCAGCCAGATGGTCTACAAGCACGCGATTTCCACCGTGGTGCCGGCGCGCAACGTGCGCCTGGGCGGGGCGGGGGAATCTGGCGATGCCGGCGAGCCCGTGCAGCCGCAGGTCGAAGCCGACTGA
PROTEIN sequence
Length: 91
MTKSQSLQDPFLNALRRERVPVSIYLVNGIKLQGTIESFDQFVILLRNTVSQMVYKHAISTVVPARNVRLGGAGESGDAGEPVQPQVEAD*