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scnpilot_solids1_trim150_scaffold_3730_curated_7

Organism: solids_Xanthomonadales_2

partial RP 17 / 55 MC: 2 BSCG 18 / 51 MC: 2 ASCG 7 / 38
Location: 4856..6538

Top 3 Functional Annotations

Value Algorithm Source
Tetratricopeptide domain-containing protein n=1 Tax=Variovorax paradoxus B4 RepID=T1X551_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 52.7
  • Coverage: 347.0
  • Bit_score: 327
  • Evalue 2.50e-86
tetratricopeptide domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 52.7
  • Coverage: 347.0
  • Bit_score: 327
  • Evalue 8.00e-87
Uncharacterized protein {ECO:0000313|EMBL:EJL78704.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.8
  • Coverage: 480.0
  • Bit_score: 248
  • Evalue 1.60e-62

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1683
ATGCCTCGCGTCGCGTCAACCGTACTTGGCCTTGCCGCCCTGATCCTGCTGGCTTGTCCGCCCGTCCGCGCCGGCTGCGCTGCGACGGGGGATGAGGTGAGCGCCGCGCCGGCCGCGAGCACCCCGCAGAACGTCCCCACGCCTGGGCCGCCGGCGCCCGTGCCGCCAGCGCCAGCTCCCGATGCCAGCGCCGAGGCGCGCGCGGTGCTGGCCGCGGTCGGCAGGCTGGACGATGCCGACACCGCGCTGGCGCTGGCCGCGGAAGGCGCCGCGCTGTACGACGCCGAGAAGGTCAAGCTGGATGGCTACGCCTATTGCAGCCAGGCGGTGGAGTTGGCGGAACAGGGCGAGTTCCGCGAGAGCGCGCGCGCCGCCAGCAAGGCGATGCACGTGGCCCTGCAGAGCGGCAATACCGACCTGCTGGGCAAGGCCTATCGCGACCTGGCGATTGCCTTCAGCTATGCCGGCCAGCTGGAGCGCGCGGAACAGTTCGCCAACCTCGCGCTCAAGTATCCCGGCATCGACCCGACCCAGGTCAACGGCCCCGCGCGCAAGGTGATTGGCGACGTGCGCACGCGCCAGGCGCGCTACGACGAAGCCATCGCCGCCTACGACCAGGCCCGCGGCGACAGCTCGCCGCGCTTCCGCCCGCTGGTTGAAGCCTCGCTTGCAAACGCCTTGATCCTGTCCGGCGACCTGGCGCGCGCGCGCGCCACCCTGGACGCGGTGCCCGTGCCTGCCGACGCCCGCCAGCAGGCCCAGCTGCAGCGCACCCGCGGCCGCCTGCTGCTGGCTGAAAACAAGCCCGACGAAGCGCTGGCGCTGTACCGGGAAGGCGCCGCGCTGTACGACGCCGAGAAGGTCAAGCTGGATGGCTACGCCTATTGCAGCCAGGCGGTGGAGTTGGCGGAACAGGGCGAGTTCCGCGAGAGCGCGCGCGCCGCCAGCAAGGCGATGCACGTGGCCCTGCAGAGCGGCAATACCGACCTGCTGGGCAAGGCCTATCGCGACCTGGCGATTGCCTTCAGCTATGCCGGCCAGCTGGAGCGCGCGGAACAGTTCGCCAACCTCGCGCTCAAGTATCCCGGCATCGACCCGACCCAGGTCAACGGCCCCGCGCGCAAGGTGATTGGCGACGTGCGCACGCGCCAGGCGCGCTACGACGAAGCCATCGCCGCCTACGACCAGGCCCGCGGCGACAGCTCGCCGCGCTTCCGCCCGCTGGTTGAAGCCTCGCTTGCAAACGCCTTGATCCTGTCCGGCGACCTGGCGCGCGCGCGCGCCACCCTGGACGCGGTGCCCGTGCCTGCCGACGCCCGCCAGCAGGCCCAGCTGCAGCGCACCCGCGGCCGCCTGCTGCTGGCTGAAAACAAGCCCGACGAAGCGCTGGCGCTGTACCGGCAGCTGGCTGATGCCCCCGCCGCAGGCGACGAGGATTTCTATCGCGCATGGGCGCTGGATGGCATCTCCAAGAGCCAGGCCGCGCTGGGTCGGGACGCCGAGGCCGCGCAGGCGCTGGACCAGGCGATCGAGGTATTCGATCGCGCCCGCGCGCAGTTCCGCAGCGACGAATTCAAGATGGGCCTGTTTTCCGACCTGCAGGCGGTGTTCGAGCGCGCCATCGGCCTGCACAGCCGGCTGGGCCAGCCGGCGCAGGCCTTCGACATCAGCGAGCGCAGCCGC
PROTEIN sequence
Length: 561
MPRVASTVLGLAALILLACPPVRAGCAATGDEVSAAPAASTPQNVPTPGPPAPVPPAPAPDASAEARAVLAAVGRLDDADTALALAAEGAALYDAEKVKLDGYAYCSQAVELAEQGEFRESARAASKAMHVALQSGNTDLLGKAYRDLAIAFSYAGQLERAEQFANLALKYPGIDPTQVNGPARKVIGDVRTRQARYDEAIAAYDQARGDSSPRFRPLVEASLANALILSGDLARARATLDAVPVPADARQQAQLQRTRGRLLLAENKPDEALALYREGAALYDAEKVKLDGYAYCSQAVELAEQGEFRESARAASKAMHVALQSGNTDLLGKAYRDLAIAFSYAGQLERAEQFANLALKYPGIDPTQVNGPARKVIGDVRTRQARYDEAIAAYDQARGDSSPRFRPLVEASLANALILSGDLARARATLDAVPVPADARQQAQLQRTRGRLLLAENKPDEALALYRQLADAPAAGDEDFYRAWALDGISKSQAALGRDAEAAQALDQAIEVFDRARAQFRSDEFKMGLFSDLQAVFERAIGLHSRLGQPAQAFDISERSR