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scnpilot_solids1_trim150_scaffold_5191_curated_7

Organism: solids_Xanthomonadales_2

partial RP 17 / 55 MC: 2 BSCG 18 / 51 MC: 2 ASCG 7 / 38
Location: 5194..6156

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.2
  • Coverage: 307.0
  • Bit_score: 458
  • Evalue 5.90e-126
mraW; S-adenosyl-methyltransferase MraW; K03438 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] similarity KEGG
DB: KEGG
  • Identity: 73.1
  • Coverage: 308.0
  • Bit_score: 440
  • Evalue 3.70e-121
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Xanthomonas translucens pv. translucens DSM 18974 RepID=L0ST60_XANCT similarity UNIREF
DB: UNIREF100
  • Identity: 76.2
  • Coverage: 302.0
  • Bit_score: 444
  • Evalue 1.10e-121

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Taxonomy

Lysobacter daejeonensis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 963
GTGAGCGGCGGTGGCGCGGGCATCGCGTCCGCCCACCTCCCGGTGCTGTTTGCCGAGGTCATGGACGGTCTGGCGGTGAAAGAGGACGGAACCTACCTGGACGGGACGTTCGGGCGTGGCGGTCATGCCCGTGGGGTGCTGCAACGGCTTGGCGAAAAGGGGCGTTTGCTGGCGATGGACAAGGACCCGGACGCGATCGCGGTGGCCATGCAGATGGCCGACGCCGACGCGCGCCTGTCCTGGCATCGCGGCAGCTTCGCCAGCCTGGCCGACTGGCCGGCAACCGCGGCGGGCCTGGACGGGGTGTTGCTCGATCTCGGCGTGTCCTCGCCGCAGCTGGACGTGGCCGAGCGCGGCTTCTCGTTCGGCAAGGACGGCCCGCTGGACATGCGCATGGATCCCGAGTCCGGCGAGAGCGCCGCCGAGTGGCTGGCGCGGGCTTCGGAAAAGGACATCGCCGACGTGCTGTGGATCTACGGCGAGGAGCGCCAGAGCCGGCGCATCGCACGGGCAATCGTGGCGGCACGCGCGCAGGCGCCGCTGCTGCGCACCGCGCAGCTGGCCGAACTGATCGCGCAGGCCTGCCCGCGCGGTGCCAGCAAGACGCATCCGGCCACGCGCAGCTTCCAGGCCATCCGCATCCACATCAACCGCGAGCTGGCCGACCTCGAGGCCGGCCTCGATGCCGCGCTGTCGCGACTGAAGCCGGGTGGACGGCTGGCGGTGATCAGCTTCCACTCGCTGGAAGACCGCATCGTCAAGCAGTTCATGGCGAAGCACGCCAAGGCGCCGCCGGCCAACCGGCGCATGCCGGTCGAGGTGCCGTTCACGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGCCGCCAACCCGCGCGCGCGCAGCGCTGTGCTGCGGGTGGCCGAGAAACTGCCGGTCGAAAGCCGGGCGGTGGCGGCATGA
PROTEIN sequence
Length: 321
VSGGGAGIASAHLPVLFAEVMDGLAVKEDGTYLDGTFGRGGHARGVLQRLGEKGRLLAMDKDPDAIAVAMQMADADARLSWHRGSFASLADWPATAAGLDGVLLDLGVSSPQLDVAERGFSFGKDGPLDMRMDPESGESAAEWLARASEKDIADVLWIYGEERQSRRIARAIVAARAQAPLLRTAQLAELIAQACPRGASKTHPATRSFQAIRIHINRELADLEAGLDAALSRLKPGGRLAVISFHSLEDRIVKQFMAKHAKAPPANRRMPVEVPFTXXXXXXXXXXXXXXXXXAANPRARSAVLRVAEKLPVESRAVAA*