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scnpilot_solids1_trim150_scaffold_1800_curated_28

Organism: solids_Xanthomonadales_2

partial RP 17 / 55 MC: 2 BSCG 18 / 51 MC: 2 ASCG 7 / 38
Location: 25696..27996

Top 3 Functional Annotations

Value Algorithm Source
LPS-assembly protein LptD n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WQK5_PSEUU similarity UNIREF
DB: UNIREF100
  • Identity: 59.8
  • Coverage: 761.0
  • Bit_score: 943
  • Evalue 1.30e-271
LPS-assembly protein LptD {ECO:0000256|HAMAP-Rule:MF_01411, ECO:0000256|SAAS:SAAS00019908}; Flags: Precursor;; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.0
  • Coverage: 762.0
  • Bit_score: 961
  • Evalue 8.70e-277
organic solvent tolerance protein; K04744 LPS-assembly protein similarity KEGG
DB: KEGG
  • Identity: 59.8
  • Coverage: 761.0
  • Bit_score: 943
  • Evalue 4.20e-272

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Taxonomy

Pseudoxanthomonas suwonensis → Pseudoxanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2301
GTGCGTCCCGTCCTGCGTCTGCTTCCCCTGTCCCTGTGCGTCGCGCTCTGCCTGCAGGCGCGCGCCGCCGACGACCCGCCGCAGAGCTGGCGGCTGTGCCCGATCGGTGACGTGGTGCCGCCCTTCGCCGACGCCATCCGCGCGCCGGAGGGACTGAATATCGACCCCACCGGGGAAACCCCCACCGACATCGAGGGCGACCTGCTGTCCGGCACGGACGCCAACCCGGTGTTCCAGGGCAATGTGACCATGCGCAGGGGCAACCAGTTCATGGGCGCGGACCAGCTCACCTTCGACAAGGAGGCGGGCCAGTACGCGGCAGAAGGCAGCGTGCGCTTCCAGGCCCGCGGCCTGCGCCTGCGCGCGGCGCGCGCCGAGGGCGACCAGGGCAGTGACACCCACACCATGGAAGACCTGCAGTACCAGCTGCTGTCGCGGCGCGGCAACGGCAAGGCGGACAGCCTGAACCTGGTCGGGGAGCTCGGCAGCCTGCGCGGCGCGACCTTCTCCACCTGCCCGCCGGAGCAGCGCCACTGGGAAGTGAGCGCGCGCCGGATCGATATCGACACCGATTCCGGCATGGCGGTGGCCCGCGGGGCCAGCCTGCGGGTCGGCAAGGTACCGGTGCTCTACATGCCGTGGTTCATGTTCCCCACCGATGAGCGCCGGCGCACCGGCCTGCTGTATCCGTCGATCTCCAACTCCGGCCGCAACGGCTTCGACTGGCGCCAGCCGGTCTACCTGAACCTGGCGCCTAACTACGACGCCACCCTCAGTCCGCGCTGGATGAGCAAGCGCGGCGCGCTGCTGGGCGCCCAGTTCCGTTACCTGCTGGAGAACGGCGAAGGCACGCTGGACGGCGTCTGGATGCCGAATGACGACCTGCGCGACCGCAGCCGCGGGCTGGCCCACTTCGAAGGGGTGCACAACCTGGCGCCGGACTGGCAGGCGCGCGCCAGCCTCAACTGGATCAGCGACCCGCGCTACTACGAAGACTTCAGCAGCAGCATCGACGGCCTGTCGCAGGCCACGTCCTACAGCGCGCTGGGCGTCTACGGCCGCGGCCGCGACTGGACCGCCGGCGTGGTTGCCGATCACTGGCAGCTGGCGGACTACACCCTGACCGACGCGGTGCTGCCTTATGACCGCCTGCCGCGCGCCTACCTGAACTGGGAACGCCGCGTCGGCGGCCTGCTGCGCGCAGGCGTGGATGCCGAGGCGGTGCGCTTCCATCACCCGATCTACGCCGCCGGCTCGCGCGTGGACCTGCGCCCGTGGATCGGCGCCCCGCTGGAAGGCGACGCCTGGTTCCTGCGCCCCACCCTCGCCTGGCGCTACACCGGCTATTCGCTCGACCGCGCACTGGGACAGGCGCTGGGCGGGGAATCGCCATCACGCGCGCAATCCATCTTCAGCGTCGACACCGGCCTGTTCTTCGATCGCGAAACCCAGGTCAAGGGCAAGCGTTACCTGCAGACCATCGAACCGCGCCTGTTCTACCTGAACGTGCCCTACGAGGACCAGGGCGACATGCCGGTGTTCGACACCCAGCCGCTGACCTTCAGCTGGAGCCAGCTGTTCCGCGAGAACCGCTATTCCGGCGCCGACCGCCAGGCCGATGCCAACCAGATCACGCTGGCGGTCAGCTCGCGCATGATCCGCCAGGCGGATGGCTTCGAACGCTTCTCCGCCAGCCTCGGACAGATCCGCTACCTCAAGGAATCGCTGGTGCGGCTGCCCAACGAGCCGGTGACGGAGAAGGGGCGCTCGGCGTGGGTGGCCGACGTCAACTACGCGCCCACCGACCGCTGGACCATCGGCGCTTCCTACCAGCGCGACCCGAAATTCAAGCGCACCGACCTCGCCAGCCTGCGCGCGCGCTACCTGCTGCCCGACGAAGGCGTGTTCAATCTCGCCTACCGCTACCGTCGCGCGCTGCTGGAACAGATGGACGTCTCCTTCCTGTACCCGCTGAACGCCAGCTGGAGCCTGGTCGGTCGCGGCTACTACTCGCTGCGCGACCGCAAGGCGCTGGAAAGCCTGGCCGGGGTGCAGTGGGACAGCTGCTGCGTGGCGATGCGCCTGGTCGCCCGCCGCTACGTGCACAACCGTGCGGGCGAGCTGAGCAACGCATTGATGTTCGAGATCGAACTCAAGGGGCTCGGCTCCGCCGGCCAGGATGCGCGGCGCGCCTTGCGCCGGTCCATCCTCGGCTACAATCGCGACGACCTTTATCTGGTGCCGCCGCAGACCGCCACGGGCCAGCCTTCCCCGCCCGACAACGCGAACGCCAATCCATGA
PROTEIN sequence
Length: 767
VRPVLRLLPLSLCVALCLQARAADDPPQSWRLCPIGDVVPPFADAIRAPEGLNIDPTGETPTDIEGDLLSGTDANPVFQGNVTMRRGNQFMGADQLTFDKEAGQYAAEGSVRFQARGLRLRAARAEGDQGSDTHTMEDLQYQLLSRRGNGKADSLNLVGELGSLRGATFSTCPPEQRHWEVSARRIDIDTDSGMAVARGASLRVGKVPVLYMPWFMFPTDERRRTGLLYPSISNSGRNGFDWRQPVYLNLAPNYDATLSPRWMSKRGALLGAQFRYLLENGEGTLDGVWMPNDDLRDRSRGLAHFEGVHNLAPDWQARASLNWISDPRYYEDFSSSIDGLSQATSYSALGVYGRGRDWTAGVVADHWQLADYTLTDAVLPYDRLPRAYLNWERRVGGLLRAGVDAEAVRFHHPIYAAGSRVDLRPWIGAPLEGDAWFLRPTLAWRYTGYSLDRALGQALGGESPSRAQSIFSVDTGLFFDRETQVKGKRYLQTIEPRLFYLNVPYEDQGDMPVFDTQPLTFSWSQLFRENRYSGADRQADANQITLAVSSRMIRQADGFERFSASLGQIRYLKESLVRLPNEPVTEKGRSAWVADVNYAPTDRWTIGASYQRDPKFKRTDLASLRARYLLPDEGVFNLAYRYRRALLEQMDVSFLYPLNASWSLVGRGYYSLRDRKALESLAGVQWDSCCVAMRLVARRYVHNRAGELSNALMFEIELKGLGSAGQDARRALRRSILGYNRDDLYLVPPQTATGQPSPPDNANANP*