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scnpilot_solids1_trim150_scaffold_2637_curated_1

Organism: solids_Xanthomonadales_2

partial RP 17 / 55 MC: 2 BSCG 18 / 51 MC: 2 ASCG 7 / 38
Location: comp(3..494)

Top 3 Functional Annotations

Value Algorithm Source
exonuclease RNase T and DNA polymerase III; K13288 oligoribonuclease [EC:3.1.-.-] similarity KEGG
DB: KEGG
  • Identity: 80.5
  • Coverage: 154.0
  • Bit_score: 256
  • Evalue 5.10e-66
Oligoribonuclease {ECO:0000256|HAMAP-Rule:MF_00045}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00045};; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.5
  • Coverage: 154.0
  • Bit_score: 256
  • Evalue 2.30e-65
oligoribonuclease n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0003066F36 similarity UNIREF
DB: UNIREF100
  • Identity: 80.5
  • Coverage: 154.0
  • Bit_score: 257
  • Evalue 9.40e-66

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Taxonomy

Pseudoxanthomonas suwonensis → Pseudoxanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 492
ATGCCCTCACCCCAATGCGTGTGCGAGCCCATGGCTGCCGATCCCACCCAAGACCGCCTGATCTGGATCGACCTGGAAATGACCGGGCTGGATACCGAGCGCGATGGCATCCTCGAGATCGCCACCGTGGTGACGGACGGCCAGCTCAACGTGCTGGCGGAAGGGCCCGAACTGGCCATTACCCATCCGTTGGCCACACTGGAGGCGATGGACGAGTGGAACCGCACCCAGCACGGCGGGTCAGGGCTGTGGCGCCGGGTGCTGGAAGAGGGCGTGCCGCTGGCCGAGGCCGAGGCGCGCACGCTGGCATTCCTGCAGGAATGGGTGCCGGCCAACGCCTCGCCGATGTGCGGCAATTCGATCTGCCAGGACCGGCGTTTCCTGCATCGACTGATGCCCGCGCTGGAGCGGCATTTCCACTACCGCAACCTCGACGTCAGCACGCTCAAGGAATTGGCGCGTCGCTGGTCGCCGGCGGTGCTCGAGGGCGTG
PROTEIN sequence
Length: 164
MPSPQCVCEPMAADPTQDRLIWIDLEMTGLDTERDGILEIATVVTDGQLNVLAEGPELAITHPLATLEAMDEWNRTQHGGSGLWRRVLEEGVPLAEAEARTLAFLQEWVPANASPMCGNSICQDRRFLHRLMPALERHFHYRNLDVSTLKELARRWSPAVLEGV