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scnpilot_solids1_trim150_scaffold_3912_curated_3

Organism: solids_Xanthomonadales_2

partial RP 17 / 55 MC: 2 BSCG 18 / 51 MC: 2 ASCG 7 / 38
Location: 1535..1867

Top 3 Functional Annotations

Value Algorithm Source
conjugal transfer protein TrbC n=1 Tax=Hoeflea sp. 108 RepID=UPI0003815591 similarity UNIREF
DB: UNIREF100
  • Identity: 96.4
  • Coverage: 110.0
  • Bit_score: 204
  • Evalue 4.90e-50
Conjugal transfer protein TrbC {ECO:0000313|EMBL:KHJ55165.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 110.0
  • Bit_score: 210
  • Evalue 1.60e-51
trbC; conjugal transfer protein TrbC; K03197 type IV secretion system protein VirB2 similarity KEGG
DB: KEGG
  • Identity: 94.5
  • Coverage: 110.0
  • Bit_score: 196
  • Evalue 3.20e-48

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Taxonomy

Aureimonas altamirensis → Aureimonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 333
ATGATTAAGCATGCCCTGCGCATCCGCCGCCACATCGCCACGGCGGTGTCGGTCACCTTCCTCACACTCGCCCTGGCGCCGGCCGCCCATGCGTCGGGTTCGTCGATGCCGTGGGAGGCGCCACTTCAGTCGATCCTTGAATCGATCGAGGGGCCGGTCGCCAAGATCATCGCCGTGATGATCATCATCATCACCGGTCTGACGCTCGCCTTCGGCGATACGTCCGGTGGCGCTCGTAAGCTGATCCAGATCGTGTTCGGCCTGTCGATCGCCTTCGCCGCGTCGAGCTTCTTCCTGTCCTTCTTCTCGTTCGGCGGCGGGGCGCTCGTCTGA
PROTEIN sequence
Length: 111
MIKHALRIRRHIATAVSVTFLTLALAPAAHASGSSMPWEAPLQSILESIEGPVAKIIAVMIIIITGLTLAFGDTSGGARKLIQIVFGLSIAFAASSFFLSFFSFGGGALV*