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scnpilot_solids1_trim150_scaffold_3751_curated_8

Organism: solids_Xanthomonadales_2

partial RP 17 / 55 MC: 2 BSCG 18 / 51 MC: 2 ASCG 7 / 38
Location: 5445..5858

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S6, partial n=1 Tax=Xanthomonas sp. M97 RepID=UPI0003B6ACF4 similarity UNIREF
DB: UNIREF100
  • Identity: 77.3
  • Coverage: 141.0
  • Bit_score: 220
  • Evalue 8.20e-55
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.5
  • Coverage: 142.0
  • Bit_score: 236
  • Evalue 2.00e-59
rpsF; 30S ribosomal protein S6; K02990 small subunit ribosomal protein S6 similarity KEGG
DB: KEGG
  • Identity: 78.0
  • Coverage: 141.0
  • Bit_score: 220
  • Evalue 3.40e-55

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Taxonomy

Lysobacter capsici → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 414
ATGCGTCACTATGAAATCGTGTTCCTGGTCCATCCGGACCAGAGCGAGCAGGTCCCGGCGATGATCGAGCGCTACAAGGGCGCCATCGAGGCCGGCAACGGCAAGATCCACCGCCTGGAAGACTGGGGCCGCCGCCAGCTGGCCTACCCGATCCAGAACCTGGTGAAGGCGCACTACGTGCTGCTGAACATCGAGGCCGAGCAGTCCGTGCTGGACGAGCTGGTCGACACGTTCCGCTTCAACGACGCGATCCTGCGCCACCTGGTCATGCGTCGCGACGACGCGGTGACCGAGCAGTCCCTGATCATGAAGAACAAGGACGAGAAGGGCGACAAGCCCGAGCGTCGCCGCCGCGACGACGAGAGCGACAGTGCCGTGGGCACTGGCGAATCCGATAACGCCGAAGCCGCCTGA
PROTEIN sequence
Length: 138
MRHYEIVFLVHPDQSEQVPAMIERYKGAIEAGNGKIHRLEDWGRRQLAYPIQNLVKAHYVLLNIEAEQSVLDELVDTFRFNDAILRHLVMRRDDAVTEQSLIMKNKDEKGDKPERRRRDDESDSAVGTGESDNAEAA*