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scnpilot_solids1_trim150_scaffold_2111_curated_12

Organism: solids_Xanthomonadales_2

partial RP 17 / 55 MC: 2 BSCG 18 / 51 MC: 2 ASCG 7 / 38
Location: comp(7864..9495)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.1
  • Coverage: 565.0
  • Bit_score: 747
  • Evalue 1.80e-212
ribosomal large subunit pseudouridine synthase b (rrna pseudouridylate synthase b) protein; K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] similarity KEGG
DB: KEGG
  • Identity: 66.7
  • Coverage: 553.0
  • Bit_score: 692
  • Evalue 9.20e-197
Pseudouridine synthase n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UTV5_PSEUP similarity UNIREF
DB: UNIREF100
  • Identity: 66.7
  • Coverage: 553.0
  • Bit_score: 692
  • Evalue 2.90e-196

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Taxonomy

Lysobacter dokdonensis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1632
ATGAGCAATAAGGAAACAACCCGCCGCCCGCTGAGCCTGAAGCGCGCCGCCACCGAAACCGCCGCCGCCCCGCAGATCAGCGAACGCCTGCACAAGGTGCTGGCGCAGGCCGGCCTCGGCTCGCGCCGCGCGCTGGAAGCCCGCATCGCCGACGGTCTGGTCAAGGTCAACGGCGAGGTCGCGCAGACCGGCATGAGCATCACCGGCGGCGACAAGATCGAGATCGACGGCCGCACCTTCGTGGCCAGCGCGCTGACCGATCCGCCGCGCGTGCTGATGTACAACAAGCCGGAAGGCGAAGTGACCACCCGCGAAGACCCCGAAGGCCGCCCGACCATCTTCGACGCACTGCCGTCGCTGAAGGGCGCGCGCTGGATCGCGATCGGCCGCCTCGACATCAACACCACCGGCCTGCTGCTGCTCACCACCGACGGCGAGCTGGCAAACGCGATGATGCATCCCAGCCACGAGGTGGAACGCGAATACGTCTGCCGCGTGCGCGCGCCGGAAGGCGAGGAAACCGTGTCCGACAAGCTGGTCGACCGGCTGGCCCGCGGCGTTGCGCTGGAGGACGGCCCGGCCAAATTCGACGAGATCGAACGCGTGACCGGCGCCAATGCCCCGCAGGAAAGCAGCCACGACTGGTTCCGGGTGCTGCTGAAGGAAGGCCGCAACCGGGAAGTGCGCCGGCTCTGGGAATCGCAGGGCTGCCAGGTCAGCCGCCTCAAGCGCATCCGCTATGGCCAGGTGCGCCTGCCGCAGCCGCTGCTGCGCGGGCACTCGCAGGAGCTGCCGCAGGCCGAGGTCGAGGCGCTGCGCAAGGCGGTCGGGCTGGAAGACGGTACGCCGTCCGCGCTGACGCTGATGCCGGTGCTGGGCCAGCGCAAGGCCGGCAAGACCGTGGTCGCCGGCAACGCCCGTAGCCACGGCTACGTCGGCGGCCACACTACCGCCGATGAAGGCCGCGAACTGCGCCGCTTCGACGCCTTCCGCGAGGATCGCGGTCGCCGCGGCGCCCCCCGCAAGCCCGGTGGCCTGACCGTCAGCGGCGAGATGGCGGCGGCGCAACGCGACAAGCGCCTGAAGGTGAAGGGTCCGCGCCAGCCCGGCCAGCGCATGAAGCCCGGCGAGCAGCGTGGCGAGAATCCGGCGGCGATGCGCACCTGGTTCGTGCCGGATGGCGTGGACACCGGCCCCTCCGGCCACCGCAACCCCGGCCAGCGTGGGCCGAAGAAATTCGGCGACAAGCCCTATGGCGAACGCAGTGGCGGCGCTGGCCGCCCCGGCGGCGGCAAGCCGCGTGGTCCTGGTGCAGGGTTCGGTGGCGACGCCCGCGGCCCGAAGCCGTTCGGTGAGCGCGGCCCGCGCCGCGAGGGCGGACAGGGTGCCGGCGAAGCACGCCCGCAGCGCGCACCCAAGCCCTACGGGCACCCGGGCAATGCACCGCACTTCCCGTCCGACCATGCCCACGGCGGCAGCTTCAATCCCTACGCCACGCAGCAGCAGCGCCCGCGTGGCGGCAAGCCCGGCGGTGGCGGTCGGCCCGGCGGCAATGCCGGCCCCCGCGGTCCGCGTCCGGCAGGCGGCCGGCCCGGCGGTGGCAACCGCGGCCCGCGCAGCGGCAATCGCTGA
PROTEIN sequence
Length: 544
MSNKETTRRPLSLKRAATETAAAPQISERLHKVLAQAGLGSRRALEARIADGLVKVNGEVAQTGMSITGGDKIEIDGRTFVASALTDPPRVLMYNKPEGEVTTREDPEGRPTIFDALPSLKGARWIAIGRLDINTTGLLLLTTDGELANAMMHPSHEVEREYVCRVRAPEGEETVSDKLVDRLARGVALEDGPAKFDEIERVTGANAPQESSHDWFRVLLKEGRNREVRRLWESQGCQVSRLKRIRYGQVRLPQPLLRGHSQELPQAEVEALRKAVGLEDGTPSALTLMPVLGQRKAGKTVVAGNARSHGYVGGHTTADEGRELRRFDAFREDRGRRGAPRKPGGLTVSGEMAAAQRDKRLKVKGPRQPGQRMKPGEQRGENPAAMRTWFVPDGVDTGPSGHRNPGQRGPKKFGDKPYGERSGGAGRPGGGKPRGPGAGFGGDARGPKPFGERGPRREGGQGAGEARPQRAPKPYGHPGNAPHFPSDHAHGGSFNPYATQQQRPRGGKPGGGGRPGGNAGPRGPRPAGGRPGGGNRGPRSGNR*