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scnpilot_solids1_trim150_scaffold_3767_curated_4

Organism: solids_Xanthomonadales_2

partial RP 17 / 55 MC: 2 BSCG 18 / 51 MC: 2 ASCG 7 / 38
Location: comp(1756..2211)

Top 3 Functional Annotations

Value Algorithm Source
transcription antitermination protein NusB n=1 Tax=Xanthomonas sp. SHU199 RepID=UPI0003696F1E similarity UNIREF
DB: UNIREF100
  • Identity: 75.0
  • Coverage: 148.0
  • Bit_score: 227
  • Evalue 1.30e-56
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.0
  • Coverage: 148.0
  • Bit_score: 227
  • Evalue 1.80e-56
NusB; transcription termination factor NusB; K03625 N utilization substance protein B similarity KEGG
DB: KEGG
  • Identity: 73.6
  • Coverage: 148.0
  • Bit_score: 219
  • Evalue 8.30e-55

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Taxonomy

Xanthomonas sacchari → Xanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 456
ATGAACAAGCATCATCGTCGTCCCGACGGCATCGATCCCGTGGCCCGTTCGCGCTCGCGCCGGCGCGCGCTGCAGGCGATCTATGCCTGGCAGATCAACCATGCCGACGAGCGCGCGCTGATCGCACAGTTCGCCCACGAACAGGCCCACGAGATCGCCGACCTCGAGTACTTCGAGGACCTGGTGCGCGGCGTGCTCCGCCACACCGCCGAGCTGGACGCGGCGCTGGCCGGCCATCTGGACCGCGGGATCGAGGAAGTGGACCAGATCGAGCGGGCCGCGCTGCGGATCGCCGCCTACGAGCTGACCCACCGCCCGGACGTGCCGTACCGCGTGGTCATCAACGAAGCCATCGACTCCACCAAGCGCTTCGGCTCGGAGCACGGCCACACCTACGTCAACGGCGTGCTGGACAAGGCCGCGGTGGTGCTGCGTGGCGTGGAAGCGAAGAGGTAA
PROTEIN sequence
Length: 152
MNKHHRRPDGIDPVARSRSRRRALQAIYAWQINHADERALIAQFAHEQAHEIADLEYFEDLVRGVLRHTAELDAALAGHLDRGIEEVDQIERAALRIAAYELTHRPDVPYRVVINEAIDSTKRFGSEHGHTYVNGVLDKAAVVLRGVEAKR*