ggKbase home page

scnpilot_solids1_trim150_scaffold_5701_curated_1

Organism: solids_Xanthomonadales_2

partial RP 17 / 55 MC: 2 BSCG 18 / 51 MC: 2 ASCG 7 / 38
Location: 1..1008

Top 3 Functional Annotations

Value Algorithm Source
RecBCD enzyme subunit RecC {ECO:0000256|HAMAP-Rule:MF_01486}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01486};; Exonuclease V subunit RecC {ECO:0000256|HAMAP-Rule:MF_01486}; Helicase/nuclease RecBCD subunit RecC {ECO:0000256|HAMAP-Rule:MF_01486}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.5
  • Coverage: 336.0
  • Bit_score: 314
  • Evalue 2.40e-82
exodeoxyribonuclease V subunit gamma; K03583 exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] similarity KEGG
DB: KEGG
  • Identity: 49.7
  • Coverage: 342.0
  • Bit_score: 289
  • Evalue 1.10e-75
Exodeoxyribonuclease V gamma chain n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UTI5_PSEUP similarity UNIREF
DB: UNIREF100
  • Identity: 49.7
  • Coverage: 342.0
  • Bit_score: 289
  • Evalue 3.50e-75

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudoxanthomonas suwonensis → Pseudoxanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1008
CGCCTGTCCGGCGCGCGCACTGCGCTGGCGCCGTGGATGCGGATTGATGCGGCGCTGGCACCGCTGCCCGACGAGAACGAACTGTCGCTCGACGCATTGCGCCGCTTCCTGCTGGCGCCGGCGGAACAGTTCCTGCGCCAGCGCCTGCAGTTGCTCCTGCCGGAAGCGGAAGACGGCGGCGAGGACATCGAACCCTTGCAGGCGCCTGGTCGCGGACTGACCCGCAGCCTGCTGCAGCGCGCGGTGTTCGCACGCCTGCTGGCCGGCGACGATCTGGATGCGATGCAGGCGCCGCTGCGCGCGCGCGGGCTGCTGCCATCCGGACCGCCGGGCCGGCGCGCGCTGGCGGAGATCGCCGGCGAGGTCACGCCCTACGTGGCGCCGTACGCGCAGTGGCGCGGCGCGACGGCGGCAGACACGCTGCCGCTGGAGGTGGAGATCGACGGGCTGCGCCTGCATGGCCGCATTGCCGACGCCTGGCCGCAGGGCATCGCCCGGCTGCGCTTCGGCGCGCCGAACGGCCCGTCGATGCTGCGCAACGGCCTGGACTGGCTGCTGGCACGTGCGGCCGGCGTCGAGCTGCCGTTCGTGGAGTTCCACGACATCGAGGGCGACATCGGCCCGTACACCCGCAATGCGCTGTCACGCGACGACGCGATCGAGGCGCTGGGCGCGCTGCTGGCGCTGCGTCGCGAGGGCCTGCAGCAGCCGCTGCCATTCGCGCCGTACAGCGGCTGGGAACTGTTCTCCGCGAAGACCATCAGCGCCGGCATCGGCAACGCCGCAAAGAAATGGCGCGGCAACGGCAACGGCGGCTGGGCCGAAGGCAGCGCCGAGGCGCTGCGGCTGGCGCTGCGCGGACGCGATCCGTTCGACAGTGCCGCGGCGCTGCGCGACTTCGCGCGGGTGACCGGGATCGTGTTCGGCGCCGCCACCTGCGGCCTGCCCGCGTCCATCGACATCGACGACGTGGCGCTGCCGGACGACGACGCGGAGGACGCGGCATGA
PROTEIN sequence
Length: 336
RLSGARTALAPWMRIDAALAPLPDENELSLDALRRFLLAPAEQFLRQRLQLLLPEAEDGGEDIEPLQAPGRGLTRSLLQRAVFARLLAGDDLDAMQAPLRARGLLPSGPPGRRALAEIAGEVTPYVAPYAQWRGATAADTLPLEVEIDGLRLHGRIADAWPQGIARLRFGAPNGPSMLRNGLDWLLARAAGVELPFVEFHDIEGDIGPYTRNALSRDDAIEALGALLALRREGLQQPLPFAPYSGWELFSAKTISAGIGNAAKKWRGNGNGGWAEGSAEALRLALRGRDPFDSAAALRDFARVTGIVFGAATCGLPASIDIDDVALPDDDAEDAA*