ggKbase home page

scnpilot_solids1_trim150_scaffold_5701_curated_4

Organism: solids_Xanthomonadales_2

partial RP 17 / 55 MC: 2 BSCG 18 / 51 MC: 2 ASCG 7 / 38
Location: 4492..6399

Top 3 Functional Annotations

Value Algorithm Source
recD; Exodeoxyribonuclease V alpha chain (EC:3.1.11.5); K03581 exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] similarity KEGG
DB: KEGG
  • Identity: 65.0
  • Coverage: 637.0
  • Bit_score: 765
  • Evalue 1.30e-218
RecBCD enzyme subunit RecD {ECO:0000256|HAMAP-Rule:MF_01487}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01487, ECO:0000313|EMBL:CCH14704.1};; Exonuclease V subunit RecD {ECO:0000256|HAMAP-Rule:MF_01487}; Helicase/nuclease RecBCD subunit RecD {ECO:0000256|HAMAP-Rule:MF_01487}; TaxID=1163399 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia D457.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.0
  • Coverage: 637.0
  • Bit_score: 765
  • Evalue 5.80e-218
Exodeoxyribonuclease V alpha chain n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KUG0_STEMA similarity UNIREF
DB: UNIREF100
  • Identity: 65.0
  • Coverage: 637.0
  • Bit_score: 765
  • Evalue 4.10e-218

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Stenotrophomonas maltophilia → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1908
ATGAGCCTGCTGCGCGAACTCAACCGCATCGGTGCGCTGCGCCCGCTGGACGATGCACTGGCGAATACCCTGCGCCGGCTCGATGCGGACACCCCGGACAGCGTGCTGGCCGCCGCGGCACTCGCCTCGCTGGCGGTGGCACAGGGCCATGCCGGCTTCGACCCCGCGCAGCCGCGCCTGCTGGTGGATGCCGACCTGGCGTGGCCGGATGCAGACGCTTGGGCGCAGGTCTTGGCGGCGTCGCCGTTCGTGGCCACGCCCGAGGCGGCCGATGCGCAGGCCGCCGCCGCGCCGCTGGTGTTCGAACACGGCCTGCTCTACCTGCGCCGCTACCGCGAATACGAACGCCGGCTGGCGCTGCGCCTGCGTGCGATTGCCGCCGCTACGGTGCCGGAGACAGGCATCGAACCGTTGGCGCCGCTGTTCGCGCAGCTCTTCCCCGACGCCGCCAGCGGCGACGCCCAGGCCCGCGCCGCCGCGCTGGCGCTGCGTCGCAACCTGCTGCTGGTCACCGGCGGCCCCGGCACCGGCAAGACCACCACCATTGCCCGCCTGCTGGCGCTGCGCATCGCGCAGGCGCTGCAGGCCGGCCACCCGCCGCCGCGCATCGCCCTGGCCGCGCCCACCGGCCGCGCCGCCGACCGCATGGCCGAAAGCCTGCGCCGCGCCGTGCGGCAGATGGAAACCTACGGCATCGATGACGCCCTGGCCGCGCTGCCGGGCGAGGCCAGCACCCTGCACCGCCTGCTCGGCGTGATCCCCGATGCGCCGCGCTTCCGCCATCACGCGGACAACCCGCTGCCGTTCGACATCGTGGTGGTGGACGAGGCCTCGATGGTGGACCTGCCGCTGATGTGCAAACTCGCCGAGGCGGTGGCGGATGGTGCGCAGCAGGCACCTACCCAGCTGATCCTGTTGGGCGACCCGGACCAGCTGCCCTCGGTGGAAGCCGGCGACGTGCTGGCCGGCATCCTGCGCGCCGCGGGCGCCGGCGATGCGCTGGGCGCGGACGATGCCGCCGCGCTGGCGCCGCTGCTCGGTGCGGCCGCCGTGGCCTCGGCGGCCGACAACATCCCGCCCGCGGTAGAAGCTGCAGAACCGCAGGCAACGCTGCCGCTGTTCCCTTCCTCAACGTCGGCGCCATCCGCCCTGCACGGCCACCGCATCCACCTCACCCGCGGCTGGCGCCAGAGCGACAGCCTGACGCTCGCGCCGCTGGCCGATGCCGTGCGCCGCGGCGATGCCGACGACACGCTCGCACTGCTGCGTGGCGGGAGCCTTGCCAACGTCCATTTCCACGACGGCACCGACGACCCGCTGGCCGCGCGCAGCTTCGACCTGCTGGCGCATTTCCGCAGCCTGACCAACGCGGCCGATCCCGCCACCGCGCTGGCCAGCGCCAACCGCCTGCGCCTGCTCACCGCCCTGCGCGACGGCCCGCAGGGCGCACGTGGCCTCAACGCCCGCATCGAAGCCCAGCTCTCCGGCCGCCGCATCGGCAGCCCGCCCGCATGGTTCCCCGGCCGCCTGCTGCTCATCACCGAAAACAGCTACCGCCACGGCCTGTTCAACGGCGATGTGGGCGTCTGCCTGCCGGACGCCAGCGGCGCGCTGCTGGCCTGGTTCCCCGGCGGCAGCGAAGGCGTCCGCGCCTTCCACCCCGCCGCACTGCCCGCGCACGAATCCGCCTTCGCCATGACCGTGCACAAGGCACAGGGCAGCGAATTCGACGAAGTCTGGCTGCAGCTGCCCCGCGCCGATGCCCGCGTGCTCAGCCGCGAACTGCTCTACACCGGCCTGACCCGCGCGCGGACTGCGTTGCATCTTGCAGGGAGCGCGGAGGTGATTGCCGCGGCGCTGGGAAGGCATGGGGGAAGGGTGTCGGGGTTGGGGTGGAGGTTGGAATAG
PROTEIN sequence
Length: 636
MSLLRELNRIGALRPLDDALANTLRRLDADTPDSVLAAAALASLAVAQGHAGFDPAQPRLLVDADLAWPDADAWAQVLAASPFVATPEAADAQAAAAPLVFEHGLLYLRRYREYERRLALRLRAIAAATVPETGIEPLAPLFAQLFPDAASGDAQARAAALALRRNLLLVTGGPGTGKTTTIARLLALRIAQALQAGHPPPRIALAAPTGRAADRMAESLRRAVRQMETYGIDDALAALPGEASTLHRLLGVIPDAPRFRHHADNPLPFDIVVVDEASMVDLPLMCKLAEAVADGAQQAPTQLILLGDPDQLPSVEAGDVLAGILRAAGAGDALGADDAAALAPLLGAAAVASAADNIPPAVEAAEPQATLPLFPSSTSAPSALHGHRIHLTRGWRQSDSLTLAPLADAVRRGDADDTLALLRGGSLANVHFHDGTDDPLAARSFDLLAHFRSLTNAADPATALASANRLRLLTALRDGPQGARGLNARIEAQLSGRRIGSPPAWFPGRLLLITENSYRHGLFNGDVGVCLPDASGALLAWFPGGSEGVRAFHPAALPAHESAFAMTVHKAQGSEFDEVWLQLPRADARVLSRELLYTGLTRARTALHLAGSAEVIAAALGRHGGRVSGLGWRLE*