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SCNpilot_solid_2_scaffold_42

Search features with annotation key words

Displaying items 151-180 of 194 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_2_scaffold_42_150
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(160315..161517)
DNA (1203bp) protein (401aa)
ABC transporter permease protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JDQ9_OLICO rbh
putative permease; K02004 putative ABC transport system permease protein rbh
Putative permease {ECO:0000313|EMBL:AEI07784.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans
SCNpilot_solid_2_scaffold_42_151
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(161514..162707)
DNA (1194bp) protein (398aa)
Efflux transporter, RND family, MFP subunit n=2 Tax=Oligotropha carboxidovorans RepID=B6JDQ8_OLICO rbh
Multidrug transporter MdtA {ECO:0000313|EMBL:CEG09646.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch
RND family efflux transporter MFP subunit rbh
SCNpilot_solid_2_scaffold_42_152
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(162814..163422)
DNA (609bp) protein (203aa)
Transcriptional regulator n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B4D9_9RHIZ rbh
Synthetically lethal with a defective Min system protein A {ECO:0000313|EMBL:CEG09648.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" s
transcriptional regulator rbh
SCNpilot_solid_2_scaffold_42_153
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(163783..164244)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NQI7_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS29730.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
SCNpilot_solid_2_scaffold_42_154
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(164295..164537)
DNA (243bp) protein (81aa)
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex (E2) n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3Z9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG06730.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
hypothetical protein
SCNpilot_solid_2_scaffold_42_155
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

164717..165046
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NU35_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS29728.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
cytochrome c, class I
SCNpilot_solid_2_scaffold_42_156
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(165088..166203)
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NGV1_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS29727.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
putative ABC transporter substrate-binding protein; K02067 putative ABC transport system substrate-binding protein rbh
SCNpilot_solid_2_scaffold_42_157
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(166212..166991)
DNA (780bp) protein (260aa)
ABC transporter related protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3Z6_9BRAD rbh
ABC transporter related protein {ECO:0000313|EMBL:EFI52676.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;
ABC transporter ATP-binding protein; K02065 putative ABC transport system ATP-binding protein rbh
SCNpilot_solid_2_scaffold_42_158
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(166994..168127)
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3Z5_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EFI52675.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
putative ABC transporter permease; K02066 putative ABC transport system permease protein rbh
SCNpilot_solid_2_scaffold_42_159
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

168294..168491
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NMU9_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS29724.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
SCNpilot_solid_2_scaffold_42_160
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(168755..169228)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NU29_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS29723.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
heat shock protein; K13993 HSP20 family protein
SCNpilot_solid_2_scaffold_42_161
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

169355..170338
DNA (984bp) protein (328aa)
adh1; Zn-dependent alcohol dehydrogenase Adh (EC:1.1.1.1); K13953 alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] rbh
Zinc-binding alcohol dehydrogenase n=1 Tax=Afipia felis ATCC 53690 RepID=K8NGU6_AFIFE rbh
Zinc-binding alcohol dehydrogenase {ECO:0000313|EMBL:EKS29722.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis AT
SCNpilot_solid_2_scaffold_42_162
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

170420..171154
DNA (735bp) protein (245aa)
Putative signal transduction protein with CBS domains n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3Z1_9BRAD rbh
Inosine-5'-monophosphate dehydrogenase {ECO:0000313|EMBL:CEG06738.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis
transporter rbh
SCNpilot_solid_2_scaffold_42_163
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

171747..172427
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NU22_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS29718.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
fixK2; transcriptional regulator; K15861 CRP/FNR family transcriptional regulator, nitrogen fixation regulation protein
SCNpilot_solid_2_scaffold_42_164
unknown

Not on your lists

comp(172515..172712)
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_solid_2_scaffold_42_165
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(172709..173182)
DNA (474bp) protein (158aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) RepID=F8BXV0_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI07629.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxido
SCNpilot_solid_2_scaffold_42_trna_3
unknown

Not on your lists

comp(173723..173794)
DNA (72bp)
transferRNA
SCNpilot_solid_2_scaffold_42_166
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

174032..174223
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V735_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI51045.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
SCNpilot_solid_2_scaffold_42_167
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

174300..174800
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V736_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG09500.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
hypothetical protein
SCNpilot_solid_2_scaffold_42_168
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

174947..176236
DNA (1290bp) protein (430aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylp
murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7); K00790 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] rbh
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V737_9BRAD rbh
SCNpilot_solid_2_scaffold_42_169
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

176295..176759
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V738_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI51048.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
SCNpilot_solid_2_scaffold_42_170
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

176838..178133
DNA (1296bp) protein (432aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-R
hisD; histidinol dehydrogenase HisD (EC:1.1.1.23); K00013 histidinol dehydrogenase [EC:1.1.1.23] rbh
Histidinol dehydrogenase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V739_9BRAD rbh
SCNpilot_solid_2_scaffold_42_171
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

178130..178627
DNA (498bp) protein (166aa)
UPF0262 protein HMPREF9697_02218 n=1 Tax=Afipia felis ATCC 53690 RepID=K8NQC9_AFIFE rbh
UPF0262 protein HMPREF9697_02218 {ECO:0000256|HAMAP-Rule:MF_00678}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis
hypothetical protein rbh
SCNpilot_solid_2_scaffold_42_172
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

178689..179156
DNA (468bp) protein (156aa)
Protein-tyrosine phosphatase, low molecular weight n=1 Tax=Afipia sp. 1NLS2 RepID=D6V741_9BRAD rbh
Protein-tyrosine phosphatase, low molecular weight {ECO:0000313|EMBL:EFI51051.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source=
low molecular weight phosphotyrosine protein phosphatase
SCNpilot_solid_2_scaffold_42_173
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

179249..179872
DNA (624bp) protein (208aa)
Maf-like protein AfiDRAFT_2425 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V742_9BRAD rbh
Maf-like protein AfiDRAFT_2425 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS
maf; Maf-like protein; K06287 septum formation protein rbh
SCNpilot_solid_2_scaffold_42_174
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

179875..180072
DNA (198bp) protein (66aa)
DNA gyrase inhibitor YacG n=1 Tax=Afipia felis ATCC 53690 RepID=K8NKP7_AFIFE
DNA gyrase inhibitor YacG {ECO:0000256|HAMAP-Rule:MF_00649, ECO:0000256|SAAS:SAAS00085446}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.
hypothetical protein; K09862 hypothetical protein
SCNpilot_solid_2_scaffold_42_175
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(180158..181942)
DNA (1785bp) protein (595aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DQZ3_BRAJP rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:BAL06721.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium ja
SCNpilot_solid_2_scaffold_42_trna_2
unknown

Not on your lists

180202..180274
DNA (73bp)
transferRNA
SCNpilot_solid_2_scaffold_42_176
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(181978..182415)
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0003715B42
Uncharacterized protein {ECO:0000313|EMBL:EJN13510.1}; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp
SCNpilot_solid_2_scaffold_42_177
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(182412..182624)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4C2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI52802.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
Displaying items 151-180 of 194 in total

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