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SCNpilot_solid_2_scaffold_42_33

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(38150..40348)

Top 3 Functional Annotations

Value Algorithm Source
Type I secretion system ATPase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6T5_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 92.6
  • Coverage: 732.0
  • Bit_score: 1336
  • Evalue 0.0
  • rbh
RTX-I toxin determinant B {ECO:0000313|EMBL:CEG09603.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch similarity UNIPROT
DB: UniProtKB
  • Identity: 92.6
  • Coverage: 732.0
  • Bit_score: 1336
  • Evalue 0.0
HlyB/MsbA family ABC transporter; K11004 ATP-binding cassette, subfamily B, bacterial HlyB/CyaB similarity KEGG
DB: KEGG
  • Identity: 71.3
  • Coverage: 703.0
  • Bit_score: 1006
  • Evalue 3.90e-291

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2199
ATGACCCCACAAAACGATTCAGGGCTCCTGGCCCTTGTTCTGCTGCTTCGGATGAATGGCATCGCCGCCGATGCCGGACAGGTCCGGCACGACATCGGGACTGATGCGATCGGCATCACCGAGATGCTGCGCTGCGCCCGCAGCCTTGGCCTCAAGGCGCGCAGCATCAGGACAAACTGGGCTCACCTGATGAAAACACCGCTTCCGGCGATCGCCGAGCTTGTCGACGGCGGTTTCCTGATCATCGGAAGCGCCGGCGACGGCAAGGTGCTTGTCCAGCGGACGCCCGGACTAAAACCGGAAGTCATGACCAAGGCGGCGTTCGAAGAGTTCTGGGACGGCCGCCTGGTGCTGATGACGCGACGCGCAACGCTCTCCGACCTTTCACGGCGCTTCGATATTACCTGGTTTCTCGGCGCAATCCGGAAATACCGCGGGCTTCTTGGCGAGGTTCTCGTCGCCTCCTTTTTTCTGCAGATATTCTCCCTTGTCACACCACTGTTTTTCCAGGTCGTGATCGACAAGGTACTGGTTCACCGCGGCCTTGACACGCTCCAGGTCCTGATCGTCGGCCTTGTGACGATCGCCCTGTTCGAAGCAATCCTCAGCGCGCTCCGCACTTATCTGTTTGCCCACACCACCAACAGGATCGATGTCGAACTTGGCGCCCGGCTATTCCGGCACCTGATCTCGCTACCACTCGCTTATTTCCAGAACCGTCGCGCTGGTGATTCAGTCGCGCGCGTTCGCGAGCTTGAGAATATCCGCAATTTCATTACCGGCTCGGCGCTTTCACTGATTATCGATCTTGCATTTACGTGCATCTTCTTGACCGTGATGTTTGTCTATTCCCCGCTGCTGACATGGATCGTGCTCGGCGCTTTCCCGTTTTACATTGCAATTTCGGTTGCTGCGACACCGCTCTTCCGTCGCGGCCTCGATGAAAAATTCAAACGTGGTGCGGAGAACCAGGCTTTTCTGGTTGAAAGCATCGTCGGCATGGAAACGCTGAAGGCGATGGCCGTCGAACCGCAGATGCAACGCCACTGGGAGGAGCAACTCGCCAGTTACGTCACCGCCAGCTTTCGCGTGCTCAACCTTGGCAATGTGGCCAGCCAGGCCGTCCAGTGTGTCAGCAAGCTGGTCATGGCCGCGATCCTGTTCCTCGGCGCCAAGCTTGTCATCGAAGGCCAGTTGACCGTTGGCGAACTGGTTGCCTTCAACATGCTCGCGAGCAGGGTCAACGTACCCGTGCTACGCCTTGCCCAAGTCTGGCAGGATTTCCATCAGGCTCGTCTCTCGGTCGAACGACTCGGCGACATCCTCAATACCCGGCCGGAATCGGCGAGCATGCCCCATCGCGCCGCGCTCCCGCCGATCCGTGGTGAGATCACCTTCGAGCATGTGGATTTCCATTATCGCGTCGACGGACCGACGATTCTGCACGGCGTGCAGTTTCATGTACCCGCCGGTCAGGTTGTTGGAATCGTGGGGCCCTCCGGGTCAGGCAAGAGCACGCTCGCCAAGCTTATCCAGCGCCTCTACGTGCCGGAGAGCGGCCGCGTGCTGGTGGACGGCGTCGACCTCGCGATGGTCGACACGGCCTGGCTACGCCGCCAGGTTGGCGTCGTTCTGCAGGAAGACATGCTGTTCAACCGCTCCGTGCGAGACAACATCGCACTCGCAGATCCTGCCATGCCGATGGATCAGATCGTTCACGCCGCCACGCTGGCTGGGGCGCATGAATTCATTCTCCAGCTTCCCGAAGGCTACGACACGCTGGTCGGCGAACGCGGGTGCAACCTGTCAGGCGGGCAACGGCAGCGGATCGCGATTGCCCGCGCGCTTGTTAACGACCCTCGCATCCTGATTTTCGACGAAGCGACGAGCGCGCTCGACTACGAGAGCGAACGGATCATCCAATACAACATGCGCCGCATCTGCGAAAAGCGCACAGCCATCGTGATCGCTCATCGCCTCTCAACGGTTCGGCGTGCCGATCGTATCCTCACACTCGAGCGGGGACGTCTGGTCGAGGATGGGACACATGACGAGCTGATGCGGACCAACGGGCGCTATGCCAGCCTCCATGACATACAGGCGGGAATCCATGACATCCGTCAGAAAAATTATTCCGTTTCCGGAGCGCCGGACACCGTCCCGTCACTACGAGACGGCATTCCTACCGGCAGCGCTTGA
PROTEIN sequence
Length: 733
MTPQNDSGLLALVLLLRMNGIAADAGQVRHDIGTDAIGITEMLRCARSLGLKARSIRTNWAHLMKTPLPAIAELVDGGFLIIGSAGDGKVLVQRTPGLKPEVMTKAAFEEFWDGRLVLMTRRATLSDLSRRFDITWFLGAIRKYRGLLGEVLVASFFLQIFSLVTPLFFQVVIDKVLVHRGLDTLQVLIVGLVTIALFEAILSALRTYLFAHTTNRIDVELGARLFRHLISLPLAYFQNRRAGDSVARVRELENIRNFITGSALSLIIDLAFTCIFLTVMFVYSPLLTWIVLGAFPFYIAISVAATPLFRRGLDEKFKRGAENQAFLVESIVGMETLKAMAVEPQMQRHWEEQLASYVTASFRVLNLGNVASQAVQCVSKLVMAAILFLGAKLVIEGQLTVGELVAFNMLASRVNVPVLRLAQVWQDFHQARLSVERLGDILNTRPESASMPHRAALPPIRGEITFEHVDFHYRVDGPTILHGVQFHVPAGQVVGIVGPSGSGKSTLAKLIQRLYVPESGRVLVDGVDLAMVDTAWLRRQVGVVLQEDMLFNRSVRDNIALADPAMPMDQIVHAATLAGAHEFILQLPEGYDTLVGERGCNLSGGQRQRIAIARALVNDPRILIFDEATSALDYESERIIQYNMRRICEKRTAIVIAHRLSTVRRADRILTLERGRLVEDGTHDELMRTNGRYASLHDIQAGIHDIRQKNYSVSGAPDTVPSLRDGIPTGSA*