ggKbase home page

SCNpilot_solid_2_scaffold_42_48

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(58958..60010)

Top 3 Functional Annotations

Value Algorithm Source
Extracellular solute-binding protein family 3 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6U7_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 94.0
  • Coverage: 350.0
  • Bit_score: 670
  • Evalue 1.30e-189
  • rbh
General L-amino acid-binding periplasmic protein AapJ {ECO:0000313|EMBL:CEG09591.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source similarity UNIPROT
DB: UniProtKB
  • Identity: 94.0
  • Coverage: 350.0
  • Bit_score: 670
  • Evalue 1.80e-189
aapJ2; putative general L-amino acid-binding periplasmic protein AapJ similarity KEGG
DB: KEGG
  • Identity: 88.0
  • Coverage: 350.0
  • Bit_score: 635
  • Evalue 8.60e-180
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1053
ATGGCAATTTTTTCACGCACTTTCCGAACGGGTCTGCTGCTCGGGCTCCTCGCCGCCCTGATCGTCGCGGCTGGCGCATTCATCGCACTCGACCGCTACGACACCCAGACATTGAAGCGCACGGTGAAGCGCGGCGCGGTGAATTGCGGCGTCAATGCCGGACTGCCAGGCTTTGCCAACAAGGATGCGAACGGCAACTGGTCGGGCTTCGACGTCGATGTCTGCCGCGCGGTCGCGGCCGCGATCTTCGACGACCCCGCCAAAGTCAACTTCATTCCGCTCGACGCCAATCAGCGTTTCAAGGAATTGCAGAACCGCACGGTCGACATCCTGTCACGCAATTCGACATGGAGCATGTCGCGCGAAGTCGATTACGACCTCACCTTCGCTGCAGTGTCCTATTATGATGGCGAGGGCTTCATGGTGCGGCGTTCGCGCAATATAGATTCCGCGTTGGAGCTTGGCGGAACCCGCGTCTGTGTGCAATCCGACACCACAACGCAACTTAACCTCGCGGATTATTTCAAGGTCAACAACATCACCTATGACGAGATGAAGTTCACCAATGTCCGTGACCTGCTCAAGGCCTACGAAGCCGGCCAGTGCGACGTGCTGACCACAGACACCTCGCAGCTTTATGCCTACCGGCAGAACCTCGCCAAGCCCGACGATCACGTTATTCTCGCCGACATCATTTCCAAGGAGCCGCTCGCGCCCGTGGTACGCCAGCGCGACGACCAGTGGATGCTGATCGTGAAATGGGCAGTCTATGCGATGCTCAACGCCGAGGAGCTTGGCGTGACCTCGAAGAACATCGATGAAGCTTTGACGTCGAAGAAGCCGGACGTCATGCGGCTGGTCGGCACCGAGGGCAATTACGGCGAGCAACTTGGCCTCACCAATGATTGGGCGGCGCGCATCATCCGCCGTATCGGCAATTACGGCGAGGTCTACGAGCGCAATGTCGGCCTCGGCTCCAGGCTCGGAATTCCGCGCGGCCTTAACCAGCTATGGAATGCCGGCGGCATCCAGTACGCGCCGCCGATCCGCTGA
PROTEIN sequence
Length: 351
MAIFSRTFRTGLLLGLLAALIVAAGAFIALDRYDTQTLKRTVKRGAVNCGVNAGLPGFANKDANGNWSGFDVDVCRAVAAAIFDDPAKVNFIPLDANQRFKELQNRTVDILSRNSTWSMSREVDYDLTFAAVSYYDGEGFMVRRSRNIDSALELGGTRVCVQSDTTTQLNLADYFKVNNITYDEMKFTNVRDLLKAYEAGQCDVLTTDTSQLYAYRQNLAKPDDHVILADIISKEPLAPVVRQRDDQWMLIVKWAVYAMLNAEELGVTSKNIDEALTSKKPDVMRLVGTEGNYGEQLGLTNDWAARIIRRIGNYGEVYERNVGLGSRLGIPRGLNQLWNAGGIQYAPPIR*