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SCNpilot_solid_2_scaffold_42_62

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 73669..74373

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, winged helix family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6W1_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 97.9
  • Coverage: 234.0
  • Bit_score: 459
  • Evalue 1.80e-126
  • rbh
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:EFI50971.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia. similarity UNIPROT
DB: UniProtKB
  • Identity: 97.9
  • Coverage: 234.0
  • Bit_score: 459
  • Evalue 2.50e-126
phoB; phosphate regulon transcriptional regulatory protein PhoB; K07657 two-component system, OmpR family, phosphate regulon response regulator PhoB similarity KEGG
DB: KEGG
  • Identity: 95.7
  • Coverage: 232.0
  • Bit_score: 448
  • Evalue 1.00e-123
  • rbh

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Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 705
ATGAACGCGAGAATTCTGGTTGTTGAAGATGAGGAGGCGCTGTCCACGTTGCTGCGCTACAACCTCGACGCGGAAGGTTACGACGTCGAGACGGTGGCGCGCGGAGACGATGCTGACACGCGGTTGAAGGAGCGTGTGCCCGACCTCGTGGTGCTCGACTGGATGCTGCCGGGGCTGTCCGGTATCGAACTGTGCCGCCGCTTGCGGGCACGGCCTGAAACAAAGCAGTTACCGATTATCATGCTCACAGCACGCGGCGAGGAAACCGAGCGCGTGCGCGGCCTTGCCACCGGCGCGGACGACTACATGGTCAAGCCGTTCTCGGTGCCGGAGTTGCTGGCGCGGATAAAGGGCCTGCTGCGGCGCGCGAGCCCGGAGCGCCTGGCTAACGTGCTGGTCTATGGCGACATCGAACTCGACCGCGAGAAGCGACGCGTGGCGCGCTCGGGCCGCCCGGTCGACCTCGGTCCAACCGAATACCGGCTACTCGAATTCTTTCTCCAGCATCCTGGGCGCGTGTTCAGTCGCGAGCAGTTGCTCGATGGCGTTTGGGGGCGCGACATCTATATTGACGAGCGCACCGTGGACGTCCATATCGGGCGGCTTCGCAAGCTGCTCAATCCGGGCGAGGAGCAGGATCCGATCCGCACCGTGCGCGGCGCGGGCTATGCGCTCGACGATCGCTTCGCCAAGGCGGAAGGTTGA
PROTEIN sequence
Length: 235
MNARILVVEDEEALSTLLRYNLDAEGYDVETVARGDDADTRLKERVPDLVVLDWMLPGLSGIELCRRLRARPETKQLPIIMLTARGEETERVRGLATGADDYMVKPFSVPELLARIKGLLRRASPERLANVLVYGDIELDREKRRVARSGRPVDLGPTEYRLLEFFLQHPGRVFSREQLLDGVWGRDIYIDERTVDVHIGRLRKLLNPGEEQDPIRTVRGAGYALDDRFAKAEG*