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SCNpilot_solid_2_scaffold_92_87

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(73781..74530)

Top 3 Functional Annotations

Value Algorithm Source
Putative signal transduction protein with EFhand domain n=1 Tax=Afipia sp. 1NLS2 RepID=D6V269_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 88.8
  • Coverage: 249.0
  • Bit_score: 407
  • Evalue 1.10e-110
  • rbh
Putative signal transduction protein with EFhand domain {ECO:0000313|EMBL:EFI52049.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" so similarity UNIPROT
DB: UniProtKB
  • Identity: 88.8
  • Coverage: 249.0
  • Bit_score: 407
  • Evalue 1.60e-110
calcium-binding EF-hand domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 52.3
  • Coverage: 262.0
  • Bit_score: 220
  • Evalue 8.00e-55

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Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 750
ATGTATCTGGCTTTGGCAGGTGCCGCGTCCACCGCGCTCGATCTGTTGTCGTCGCTGACGTCGCCGAAATCGTCGGCGTCGAAGCCGACGACCGGCGTCACCCAGAATTCGAATTCTTTCAGTCTGACGTCCGCCACATCGACGTCTGCGACGTCCTCCACCGCCTCGAATTGGGGGCAGAGCGGGGCTCTGTCGTCCGATACGTGGAACGCGCTGCTGGTGGCGCAATCTCCCACGGCGACAAACGCCTCGACGTCGCCGTCGGACGCGATGAAGGATCTGTTCTCGCAGATCGACGTCAACGGCGATGGTTCGATCACCAAATCGGAATTCGAACAGAAGCTCGGCGCCGGCGGTACCAATGTCGCGGCGGCTGATGACGTGTTCTCCAAGCTTGACACCGATGGAGATGGCTCCGTCAGCATCAATGAGCTGACCAGCGCGCTGCAGACCAGGAAGTCCGGCGGCAGCCATCATGGCCACGGTGGGCATGGTGGTGGAGGAGGCGGAGGTCTCGCCGATGCCCTGTCGCAATCGGTCGACGGCGCCACGACCACCACGACAACCAATTCAGACGGATCGGTGACAACGACACTGACCTATTCCGACGGCTCGAAGGTCACCTCAACCAGCGCGGCAGCGAGCGCCGGCTCATCCAGCGCGGCATCGTCCTACAACCTGATCGAGAAACTGATCCAGTCGCAGTCTCTGGCGGTCTCCAGTGCGGCGAGTTCGTCTGTCAAAGTCTAG
PROTEIN sequence
Length: 250
MYLALAGAASTALDLLSSLTSPKSSASKPTTGVTQNSNSFSLTSATSTSATSSTASNWGQSGALSSDTWNALLVAQSPTATNASTSPSDAMKDLFSQIDVNGDGSITKSEFEQKLGAGGTNVAAADDVFSKLDTDGDGSVSINELTSALQTRKSGGSHHGHGGHGGGGGGGLADALSQSVDGATTTTTTNSDGSVTTTLTYSDGSKVTSTSAAASAGSSSAASSYNLIEKLIQSQSLAVSSAASSSVKV*