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SCNpilot_solid_2_scaffold_47_106

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 104288..104752

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L13 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V9U3_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 96.8
  • Coverage: 154.0
  • Bit_score: 307
  • Evalue 9.80e-81
  • rbh
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|SAAS:SAAS00083943}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.8
  • Coverage: 154.0
  • Bit_score: 307
  • Evalue 1.40e-80
rplM; 50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 similarity KEGG
DB: KEGG
  • Identity: 94.8
  • Coverage: 154.0
  • Bit_score: 300
  • Evalue 2.20e-79
  • rbh

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 465
ATGAAGACGTTTTCGGCGAAACCGGCCGAGGTCAGCAAGAAGTGGGTGATCATCGACGCCAAGGGTTTGGTCGTCGGTCGTCTCGCCACCTTGGTCGCTATGCGTTTGCGCGGCAAGCACCTGCCGACCTACACCCCTCACGTTGATTGTGGTGACAATGTCATCATCATCAACGCCGCGCATGTCGTCCTTACTGGGCGCAAGCGCGACAACAAGATGTACTACAACCACACCGGCTTCATCGGCGGTATCAAGGAACGCACCGCAAAGTCGATCCTCGAAGGTCGTTTCCCCGAGCGTGTCGTGGAGAAGGCAGTGGAGCGCATGATTCCGCGTGGTCCGCTCGGCCGTATCCAGATGGGCAACCTGCGCGTCTATCCGGGTGCCGAGCATCCGCATGACGCCCAGAATCCGGAAGTTGTCGATATCGCTTCTCTGAACCGCAAGAACACGAGGGCCGCGTAA
PROTEIN sequence
Length: 155
MKTFSAKPAEVSKKWVIIDAKGLVVGRLATLVAMRLRGKHLPTYTPHVDCGDNVIIINAAHVVLTGRKRDNKMYYNHTGFIGGIKERTAKSILEGRFPERVVEKAVERMIPRGPLGRIQMGNLRVYPGAEHPHDAQNPEVVDIASLNRKNTRAA*