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SCNpilot_solid_2_scaffold_247_79

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 85961..86566

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal subunit interface protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V1T6_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 97.0
  • Coverage: 200.0
  • Bit_score: 384
  • Evalue 4.80e-104
  • rbh
Ribosomal subunit interface protein {ECO:0000313|EMBL:EFI53666.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NL similarity UNIPROT
DB: UniProtKB
  • Identity: 97.0
  • Coverage: 200.0
  • Bit_score: 384
  • Evalue 6.80e-104
putative sigma(54) modulation protein similarity KEGG
DB: KEGG
  • Identity: 89.6
  • Coverage: 201.0
  • Bit_score: 356
  • Evalue 4.40e-96
  • rbh

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Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 606
ATGACGCTTCGAGTTTCCGGTAAAAGCATCAACATTGGTGAAGCTATTCGCGGGCGTGTCGAAGGCCGAACGGAAGAGGTGTTACGAAAATATTTCGACGGGAATTATTCGGGGCATTTCATTTTCAGCAAGGACGGTTTTGGTTTCAAGGCTGACTGCGCGCTGCATCTGGATTCCGGCGTGACGCTGGAGGCCGATGCGATGGCCGCTGATGCATATGCCAGCGCGGATCAGGCGCTGATCCAGATCGAGAAGCGGCTGCGCCGCTACAAGAGCAGACTCAAGGATCGCTCGGCGCGCAAGGCGCATGCAGAATCCGAGGCGTTGTCCGCGATCGCCCCGGATGGCATCGATGCGTCGAGCTATGTGCTCGAGGGCCCGTCCTATGATGAAGACGATGACGAGATCACTGCGTTCAATCCGGTGGTGATCGCGGAATCGACTCACACGCTGCGGCGTTTTTCGGTGAGTGAAGCGGTGATGGAACTCGACATGACCGGCGCGCCCGTCATTGTATTTCAGCATGGCTCGAGCGGACGGGTGAATATCATCTATCGCCGTTCCGATGGCAATGTGGGCTGGATCGACCCGCCCTCGGCGACGTAA
PROTEIN sequence
Length: 202
MTLRVSGKSINIGEAIRGRVEGRTEEVLRKYFDGNYSGHFIFSKDGFGFKADCALHLDSGVTLEADAMAADAYASADQALIQIEKRLRRYKSRLKDRSARKAHAESEALSAIAPDGIDASSYVLEGPSYDEDDDEITAFNPVVIAESTHTLRRFSVSEAVMELDMTGAPVIVFQHGSSGRVNIIYRRSDGNVGWIDPPSAT*