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SCNpilot_solid_2_scaffold_83_98

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(101555..101755)

Top 3 Functional Annotations

Value Algorithm Source
Cold-shock DNA-binding domain protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V398_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 66.0
  • Bit_score: 136
  • Evalue 7.60e-30
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:EFI52428.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 66.0
  • Bit_score: 136
  • Evalue 1.10e-29
cspA3; cold shock protein CspA; K03704 cold shock protein (beta-ribbon, CspA family) similarity KEGG
DB: KEGG
  • Identity: 98.5
  • Coverage: 66.0
  • Bit_score: 135
  • Evalue 7.00e-30

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Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 201
ATGGCTAAAGGGACTGTGAAGTGGTTCAACCCAACCAAGGGCTACGGATTCATCCAGCCCGCGGGCGGCGGCAAGGATGTGTTCGTGCATATCTCGGCGGTTGAAAAAGCGGGCCTGACTTCGCTGAACGAAGGACAGACCATCGAGTTCGAGGAAGTCGCCAATCGCGGCAAGACATCGGCGGAAAACCTGAAGGTTTGA
PROTEIN sequence
Length: 67
MAKGTVKWFNPTKGYGFIQPAGGGKDVFVHISAVEKAGLTSLNEGQTIEFEEVANRGKTSAENLKV*