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SCNpilot_solid_2_scaffold_83_136

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(142588..142890)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S21 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V353_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 96.0
  • Coverage: 100.0
  • Bit_score: 186
  • Evalue 9.70e-45
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia. similarity UNIPROT
DB: UniProtKB
  • Identity: 95.0
  • Coverage: 100.0
  • Bit_score: 185
  • Evalue 3.90e-44
rpsU; 30S ribosomal protein S21; K02970 small subunit ribosomal protein S21 similarity KEGG
DB: KEGG
  • Identity: 90.0
  • Coverage: 100.0
  • Bit_score: 169
  • Evalue 5.00e-40

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Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 303
GTGCAGGTTCTCGTCCGCGATAACAATGTCGACCAGGCCCTCAAGGCGCTGAAGAAGAAGATGCAGCGCGAGGGTATTTTCCGCGAGATGAAGCTCCGCGGTCATTATGAAAAGCCCTCCGAGAAGAAGGCGCGCGAGAAGGCGGAAGCCGTTCGCCGCGCCCGCAAGCTCGCACGCAAGAAGCTGCAGCGCGAAGGTCTGCTGCCGATGAAGCCGAAGCCGGTGTTCGGCGCCGGTGCCGAGCGCGGCGCAGGTGGCCGTGGTGGCGCAGCCGGTGCTGGTGCAGCGCGCCCTCCGCGCTAA
PROTEIN sequence
Length: 101
VQVLVRDNNVDQALKALKKKMQREGIFREMKLRGHYEKPSEKKAREKAEAVRRARKLARKKLQREGLLPMKPKPVFGAGAERGAGGRGGAAGAGAARPPR*