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SCNpilot_solid_2_scaffold_84_155

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(166955..167263)

Top 3 Functional Annotations

Value Algorithm Source
Integration host factor subunit beta n=1 Tax=Afipia sp. 1NLS2 RepID=D6V1U6_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 98.0
  • Coverage: 102.0
  • Bit_score: 201
  • Evalue 3.90e-49
Integration host factor subunit beta {ECO:0000256|HAMAP-Rule:MF_00381, ECO:0000256|RuleBase:RU003941}; Short=IHF-beta {ECO:0000256|HAMAP-Rule:MF_00381};; TaxID=1035 species="Bacteria; Proteobacteria; similarity UNIPROT
DB: UniProtKB
  • Identity: 98.0
  • Coverage: 102.0
  • Bit_score: 201
  • Evalue 5.40e-49
ihfB; integration host factor subunit beta; K05788 integration host factor subunit beta similarity KEGG
DB: KEGG
  • Identity: 95.8
  • Coverage: 96.0
  • Bit_score: 187
  • Evalue 2.40e-45

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 309
ATGATCAAATCAGAACTCGTTCAGCGCATTGCCGAGCACAATCCGCACCTCTACCAGAGAGACGTGGAGAACATCGTCAACGCGATCCTCGAGGAAATTGTCTCGGCGCTGTCGCGTGGCGATCGTGTCGAGCTGCGAGGTTTCGGTGCGTTTTCGGTGAAGCACCGCCCTGCACGGGCGGGCCGCAATCCGCGCACCGGCGAGTACGTCCCCGTCGAGCAGAAAAGCGTGCCGTTCTTCAAGACCGGCAAGGAAATGCGCGAACGGCTAAATCGCAACGGCTATGACGAGGAAGCCGCGGCGTCCTGA
PROTEIN sequence
Length: 103
MIKSELVQRIAEHNPHLYQRDVENIVNAILEEIVSALSRGDRVELRGFGAFSVKHRPARAGRNPRTGEYVPVEQKSVPFFKTGKEMRERLNRNGYDEEAAAS*