ggKbase home page

SCNpilot_solid_2_scaffold_86_8

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(5076..7007)

Top 3 Functional Annotations

Value Algorithm Source
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007814}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007809};; Hydroxymethylpyrimidi similarity UNIPROT
DB: UniProtKB
  • Identity: 96.7
  • Coverage: 643.0
  • Bit_score: 1270
  • Evalue 0.0
Phosphomethylpyrimidine synthase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8Z2_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 96.7
  • Coverage: 643.0
  • Bit_score: 1272
  • Evalue 0.0
  • rbh
thiamine biosynthesis protein ThiC; K03147 thiamine biosynthesis protein ThiC similarity KEGG
DB: KEGG
  • Identity: 91.5
  • Coverage: 635.0
  • Bit_score: 1197
  • Evalue 0.0
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1932
ATGAACAAGCCTATCACAGACCTGAAAGCAGCCGTCACGACCGGGCCGTTGCCCTCGTCCCGCAAGATTTTCTCGACGCCCGACGCAGCACCCGACCTACGCGTGCCGCTGCGCGAGATCATTCTCTCCGAAGGCGCAGGTGAGCCGAACCTGGCGGTGTACGACACCTCTGGCCCCTACACCGACCCCAACGTGCTGATCGACGTTAACAACGGTCTGCCTCGCGCCCGCATGGCGTGGGTGAAGGAGCGTGGCGGCATCGAGGAATATCAGGGCCGGGACATCAAACCGGAAGACAACGGCAATGTCGGCGCCAAGCACGCTGCCGCCGCTTTCAAGGCGCACCACAAGCCGGTGCGCGGCGTCGGCGATGCGCCAATCACCCAGCTCGAATTTGCCCGCGCCGGCATCATTACCAAGGAAATGATCTACGTCGCCGAGCGCGAGAACCTCGGCCGCAAGCAGCAACTGGAGCGCGCGGAAGCCGCCCGCACCGACGGCGAGAGCTTCGGCGCCGAAATCCCGCTGTTCATCACTCCGGAATTCGTCCGTAGCGAGATCGCGCGCGGCCGTGCCATCATCCCGAGCAACATCAACCACGCCGAGTTGGAGCCGATGATTATCGGCCGCAACTTCCTGACCAAGATCAACGCGAACATCGGCAACAGCGCCGTCACCTCGTCGGTCGAAGAAGAAGTGGACAAGATGGTGTGGGCGATCCGCTGGGGCGCCGACACTGTGATGGACCTCTCCACCGGCCGCAACATCCACACCACGCGCGAATGGATTCTGCGCAACGCGCCGATTCCGATCGGCACCGTGCCGATCTATCAGGCTCTGGAGAAGTGTCCTGACGGCGATCCAGTCAAGCTGACTTGGGAGTTGTACAAGGACACCCTGATCGAGCAGTGCGAACAGGGGGTCGACTACTTTACCATCCACGCCGGCGTGCGACTGCCCTACATCCACCTCACCGCCGACCGTGTCACTGGCATTGTCTCGCGCGGCGGCTCGATCATGGCGAAATGGTGCCTTGCGCACCACAAGGAGAGCTTCCTCTATACCCACTTCGAGGAAATCTGCGACATCATGCGCAAGTATGACGTCTCGTTCTCGCTCGGCGACGGCCTGCGCCCGGGCTCGATTGCCGATGCCAACGACCGCGCCCAGTTTGCCGAACTCGAGACCCTTGGTGAACTCACGCAGATCGCGTGGAAGAAGGGTTGCCAGGTCATGATCGAAGGCCCCGGCCATGTGCCGATGCACAAGATCAAGATCAACATGGACAAGCAGCTCAAGGAGTGCGGCGAAGCGCCGTTCTATACGCTTGGGCCGCTGACCACCGACATCGCGCCGGGCTATGATCACATCACCTCGGGCATTGGTGCGGCGATGATCGGCTGGTTCGGCTGCGCGATGCTCTGCTACGTCACGCCCAAGGAGCATCTTGGCCTGCCAAACCGCGACGACGTGAAGGTCGGCGTCATCACCTACAAGATCTCGGCGCATGCCTCCGATCTCGCCAAGGGCCATCCGGCGGCGCAACTGCGCGACGACGCCCTTTCCCGCGCACGCTTCGACTTCCGCTGGGAGGATCAGTTCAACCTTGGCCTCGATCCGGAAACGGCGGTCGCCTTCCACGACGAAACGCTACCGAAGGAAGCACACAAGGTCGCGCATTTCTGTTCGATGTGCGGCCCGAAATTCTGCTCGATGAAGATCACGCAGGACGTGCGCGACTACGCTGCCAGCCTCGGCGACAACGAGAAGGCCGCGCTCTATCCTGAGGGCAAGAAGCTCAGCGGCGTCGGCATGTCGATGTCCGGCGTGATTGCGGACGGCATGGCGCAGATGAGCGAGAAGTTCAAAGCCATGGGCAATCAGGTCTATGTCGAGGCTGAGGCCGTCAAGGAGAGCAACAAGGCGCTGTAG
PROTEIN sequence
Length: 644
MNKPITDLKAAVTTGPLPSSRKIFSTPDAAPDLRVPLREIILSEGAGEPNLAVYDTSGPYTDPNVLIDVNNGLPRARMAWVKERGGIEEYQGRDIKPEDNGNVGAKHAAAAFKAHHKPVRGVGDAPITQLEFARAGIITKEMIYVAERENLGRKQQLERAEAARTDGESFGAEIPLFITPEFVRSEIARGRAIIPSNINHAELEPMIIGRNFLTKINANIGNSAVTSSVEEEVDKMVWAIRWGADTVMDLSTGRNIHTTREWILRNAPIPIGTVPIYQALEKCPDGDPVKLTWELYKDTLIEQCEQGVDYFTIHAGVRLPYIHLTADRVTGIVSRGGSIMAKWCLAHHKESFLYTHFEEICDIMRKYDVSFSLGDGLRPGSIADANDRAQFAELETLGELTQIAWKKGCQVMIEGPGHVPMHKIKINMDKQLKECGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGCAMLCYVTPKEHLGLPNRDDVKVGVITYKISAHASDLAKGHPAAQLRDDALSRARFDFRWEDQFNLGLDPETAVAFHDETLPKEAHKVAHFCSMCGPKFCSMKITQDVRDYAASLGDNEKAALYPEGKKLSGVGMSMSGVIADGMAQMSEKFKAMGNQVYVEAEAVKESNKAL*