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SCNpilot_solid_2_scaffold_86_113

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(115533..118190)

Top 3 Functional Annotations

Value Algorithm Source
putative ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1] similarity KEGG
DB: KEGG
  • Identity: 81.1
  • Coverage: 895.0
  • Bit_score: 1466
  • Evalue 0.0
  • rbh
DNA ligase D n=1 Tax=Afipia sp. 1NLS2 RepID=D6V9A3_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 86.5
  • Coverage: 884.0
  • Bit_score: 1567
  • Evalue 0.0
  • rbh
DNA ligase D {ECO:0000313|EMBL:EFI50741.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.4
  • Coverage: 884.0
  • Bit_score: 1566
  • Evalue 0.0

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Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2658
GTGGCACGCAAGAAACTCTCGGTCTATCGCACCAAACGCGACTTCACCAAAACCGCGGAGCCGAGTGGGGCTACGAAGGTGGCGCGCGGCAAGCTGCCGCGCTTCGTCATTCAGAAGCATGATGCGACGCGGCTGCATTACGACCTGCGTCTCGAATTCGATGGCGTCTTCAAATCATGGGCGGTGACGCGCGGCCCTTCGCTTGACCCCAAAGACAAGCGTCTTGCGGTGGAGGTCGAGGATCATCCTCTCGACTACGGCGATTTCGAAGGCACGATCCCGAAAGGCCAGTATGGCGGCGGTACGGTGATGCTATGGGATCGCGGCTACTGGTACAGCGACGATCCCGAAGGCGGCCTGAAGACGGGCGACCTCAAATTCACGCTGGAGGGCAAAAAGCTGCGTGGCGAGTGGGTGCTGGTGCGCATGCGCCGCGATCGCACCGGCGGCAAACGCACCAACTGGCTTCTGATCAAGCATCGCGACGAATATGCGCGCGAGGGCAAGAAAAACAACATTCTCGACGAGGACCGCTCCGTTGCCTCGGGCCGGACGATGGCCCAGATCGCACAGGGCAAGGGGCGCGGGCCGACACCGTTCATCACGGCCAAAGGAAGCTTAAACGGAGGCCGCACCAAGGCCGACCAAATATGGCAATCCAATCAGGGCATGGCTGCGAACCTGCGAGCAAAATCCGAGACGAAGACGCTTGCTCCACCCAAAGGGAAGACACCGGCGAAGGTCACGCACAAAGTGGAGCGGCTTCCTCGCTTCATCGCGCCCCAATTATGCAAATCCGTTGCGCGCCCGCCCAACGGCAATGAATGGATCCACGAAATCAAGTTCGACGGCTACCGGATGCAACTGCGCACCGAGAACAAGAAGGTCACTCTGCGCACGCGCAAGGGCCTTGACTGGACCGCAAAGTTTCCGGCGATCGCCAAGGCCGCCGCCAACCTACCTAATGGAATCATCGACGGCGAGATCGTCGCCCTCGACTACGACGGGCGTCCGAGTTTCGCATCGCTGCAAGCGGCGCTGTCAGGCAGCAATGCGGATGAGATGATCTTCTTCGCCTTCGACCTCCTGTTCAGTAAGGACAGCGATCTGCGACGATCGCCGTTGAGCGAGCGCAAGGCACAACTGAAATCGCTTCTGAAAAACAACACCGGCAGCGGCGTGATCCGTTATGTCGAGCATTTCGAGACTGGTGGCGATGCCGTGCTCAAATCAGCCTGCCGCCTGTCGCTGGAAGGAATCATCTCGAAGCGCACGGATGCTCTCTATCATTCCGGCCGCACCGACAGCTGGCGGAAAGCCAAATGCCGCGCCGGCCACGAGGTCGTCATCGGCGGCTGGAAGACCACCGCCGGCAAATTCCGCTCACTGATGGTCGGCGTGCCGCGTGACGATCACCTCGCTTATGTCGGCGTCGTTGGCACAGGATACGGCAACGATATCGTCAAACGGATCATGCCGGAATTAAGGAAGGCGGAGTCCGCGACAAATCCGTTCAGCGGCAAGAATGCGCCGAAGAAAGCGACCGGCGTGCACTGGGTCAAACCTGAACTGGTCGCCGAGATCGAATTCGCAGGCTGGACTGGCGACAACATGGTGCGCCAGGCCGCCTTCAAGGGGCTGCGCAAGGACAAGTCGGCGGACGACGTGCAGGTGGACGAGCCTGTCGCCACCACCATCGCCAGGCACGCACCGCGTCAAGTCCGTGCGAAAGCTGCGACACGCAAGCCATCGGGCCGTTCTGCAATGGTGATGGGCGTGACTATCTCGAAACCGGACAAGCCGCTCTGGCCGGATGATGGCAAGGGCGAGCCAATCACCAAGTTCGACCTCGCCCGCTACATGGAAGACATCGGCGAATATCTGCTGCCGCATATCGAGGGGCGGCCCTGCTCCGTCATCCGCGCGCCGGATGGCATCGATGGCGAGACATTCTTCCAGCGTCACGCCATGGCGGGCATGTCGAACCTCATCGGTGAACTGCGTGTATCCGGCGACCGCAAGCCGTACATCCAGATCGACCGCATCGAGGGACTCGTGGCAGCCGCACAGATCGGCGGCGTCGAGTTTCATCCGTCGAATTGCGCCATAGGCGAGCCCGACGTGCCCGGCCGCCTGGTATTCGATCTGGATCCCTCCACGGATGTTGACTTCACTGTTGTGGTGAAAGCCGCACGCGAGATGCGCAACCGCCTCTCATCGCTCGGACTGGAAAGTTTCTGCAAGACGACCGGCGGCAAAGGCCTGCATGTCGTCGTGCCGGTGAAGGACGCGGAGAAGGATCATATCGACTGGAAGGCAGCAAAGGCTTTCGCACAGGCGGTCTGTCAGACTGTGGCCGCTGATGACCCGAAACGCTATCTGCTCAACATGTCGAAGGCGAAGCGCGAGGGAAAGATCTTCCTCGACTATCTACGCAACGACCGGATGTCGACGGCGGTCGCACCGTTCTCGCCACGCGGGCGCAAATTCGCGCCGGTCTCGATGCCACTGACATGGGCACAAGTGCGGACCGGCCTCGATCCGCTGACATTCACCCTGCGCACCGTACCTGCGCTGGTGAAAAGATCGAAGGCATGGGTGGATTATGATCGCGCGGCACGCTCGCTCAAAAGCGCGATCAGGAAGATCGGAGGCTGA
PROTEIN sequence
Length: 886
VARKKLSVYRTKRDFTKTAEPSGATKVARGKLPRFVIQKHDATRLHYDLRLEFDGVFKSWAVTRGPSLDPKDKRLAVEVEDHPLDYGDFEGTIPKGQYGGGTVMLWDRGYWYSDDPEGGLKTGDLKFTLEGKKLRGEWVLVRMRRDRTGGKRTNWLLIKHRDEYAREGKKNNILDEDRSVASGRTMAQIAQGKGRGPTPFITAKGSLNGGRTKADQIWQSNQGMAANLRAKSETKTLAPPKGKTPAKVTHKVERLPRFIAPQLCKSVARPPNGNEWIHEIKFDGYRMQLRTENKKVTLRTRKGLDWTAKFPAIAKAAANLPNGIIDGEIVALDYDGRPSFASLQAALSGSNADEMIFFAFDLLFSKDSDLRRSPLSERKAQLKSLLKNNTGSGVIRYVEHFETGGDAVLKSACRLSLEGIISKRTDALYHSGRTDSWRKAKCRAGHEVVIGGWKTTAGKFRSLMVGVPRDDHLAYVGVVGTGYGNDIVKRIMPELRKAESATNPFSGKNAPKKATGVHWVKPELVAEIEFAGWTGDNMVRQAAFKGLRKDKSADDVQVDEPVATTIARHAPRQVRAKAATRKPSGRSAMVMGVTISKPDKPLWPDDGKGEPITKFDLARYMEDIGEYLLPHIEGRPCSVIRAPDGIDGETFFQRHAMAGMSNLIGELRVSGDRKPYIQIDRIEGLVAAAQIGGVEFHPSNCAIGEPDVPGRLVFDLDPSTDVDFTVVVKAAREMRNRLSSLGLESFCKTTGGKGLHVVVPVKDAEKDHIDWKAAKAFAQAVCQTVAADDPKRYLLNMSKAKREGKIFLDYLRNDRMSTAVAPFSPRGRKFAPVSMPLTWAQVRTGLDPLTFTLRTVPALVKRSKAWVDYDRAARSLKSAIRKIGG*