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SCNpilot_solid_2_scaffold_688_16

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 11427..12008

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Afipia felis ATCC 53690 RepID=K8NR01_AFIFE similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 193.0
  • Bit_score: 376
  • Evalue 1.30e-101
  • rbh
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EKS29910.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 193.0
  • Bit_score: 375
  • Evalue 3.90e-101
DNA-directed RNA polymerase sigma subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 60.9
  • Coverage: 174.0
  • Bit_score: 213
  • Evalue 7.60e-53

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 582
TTGAACGAGGCCAGGCAAAAAGAGGTGCTACCTTCTCCTGAGGAACTGATCAGCCTCATATGTGCTGTTGCGCGGCAGCAGGATCGAAATGCCTTCGCACAGCTATTCGCCTATTTCGCGCCTCGCATCAAAAGCTTCCTTCTGCGGTCAGGTCTTGCGGATTCCGTCGCCGAGGAAGTGACCCAGGAGGTCATGATCGCGGTATGGCGAAAGGCGTCTTATTTCGATCCAGGTAAAGCGGGTGCCTCGACATGGGTGTTTACGATTGCTCGCAATCAAAGGATTGACCGGCTGCGCCGCATGCAGTCTCGGACAGCCGATCATCTTTTGGATCCGAGTGATGAACCCGACATGCCACCATCGGGTGAAGACATCACAATCACGGCAGAACGGGAAGAAGGGGTGCGAAAGGCATTGGCATCCCTACCGAGCGATCAGGCAACGATCGTGCGGCTCTCTTTCTTTGCTGAGAAGCCCCATGCGGAGATCGCTCGAGAGTTGGGCATCCCGCTCGGCACCGTAAAATCCCGTGTCCGGCTGGCACTCAATCGCCTTCGGACCCTGTTGGACAACAATATATGA
PROTEIN sequence
Length: 194
LNEARQKEVLPSPEELISLICAVARQQDRNAFAQLFAYFAPRIKSFLLRSGLADSVAEEVTQEVMIAVWRKASYFDPGKAGASTWVFTIARNQRIDRLRRMQSRTADHLLDPSDEPDMPPSGEDITITAEREEGVRKALASLPSDQATIVRLSFFAEKPHAEIARELGIPLGTVKSRVRLALNRLRTLLDNNI*