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SCNpilot_solid_2_scaffold_474_16

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 21056..21994

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=2 Tax=Oligotropha carboxidovorans RepID=B6JH31_OLICO similarity UNIREF
DB: UNIREF100
  • Identity: 93.3
  • Coverage: 297.0
  • Bit_score: 548
  • Evalue 3.90e-153
  • rbh
transcriptional regulator, LysR family similarity KEGG
DB: KEGG
  • Identity: 93.3
  • Coverage: 297.0
  • Bit_score: 548
  • Evalue 1.20e-153
  • rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AEI05993.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligot similarity UNIPROT
DB: UniProtKB
  • Identity: 93.3
  • Coverage: 297.0
  • Bit_score: 548
  • Evalue 5.50e-153

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Taxonomy

Oligotropha carboxidovorans → Oligotropha → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 939
ATGGATCGCTACCATCTAGTCCTGAAATCACGACAGCTTATTGATATGTTCAATTGGAACGACCTAGTCTTTTTCCTCGAATTGGCGCGGCAAAATCGACTCGCTCCAGCAGCGCGACGGTTGCGAGTGGACCACACCACGGTCAGCCGACGGATTTCCGAACTCGAGAAGAACCTGTCGGTCAAGCTTTTTGACCGTAAACCGGACGGCTTCGTCCTGACTGAACAAGGCCATCGCCTGTTCCTTGTCGCTGAACGGATCGAGCAGGAGATCGGCAACGTACCACAGGCGCTTGGCGCCGAAAACATGGCAGCGAACGGCCGCGTCCGAGTTGTCACCATGGAAGGGATCGGTGCTTTCTTCCTCGCGGAACGCTTGGTCGAGTTGACTAAGCATCAGCCTGGAATTGTGGCAGAATTGGTGACTGAGCGTCACATCGTCAGCCTGACCAAGCGCGAGGCCGACATCTTCATTAGCTTCATTCCGCCAACGGGCCAGCGCCTCGTCGTCAAGAAGCTCGGCACCTTCCGTCTCGCCCTCTATGCCAGTTCCGGCTATATCAGCCGCAACGGGATGCCGAAGGATCACTTCGAGCTGATCCATCACACCTTCGTCGACTATGTCGAGGACTTGGTCGCGATCCAACCGGTGCGCTGGCTGCTGGATGTAGTCGACCCACTCACCGTTTCGTTCCGCTCGTCCAGTATGCACGCTCAGCAGAATGCAATTGCTGCCGGGGCAGGCATCGGTCTACTCCCGCTGTTTTCCGCAAAGCGAAATCCAGCTCTGGTACCGATCCTCGCTGACACGGTGCAAGTACATCGCGATATCTATCTATCGGTGCACGAGGATCTAGAATTCCTGGCGCGTGTACGCTCGGTGATCCGGCATCTCGGTGAGGTGTTCCAGCGCGACACTGCCTACATGAACGAACTCTAA
PROTEIN sequence
Length: 313
MDRYHLVLKSRQLIDMFNWNDLVFFLELARQNRLAPAARRLRVDHTTVSRRISELEKNLSVKLFDRKPDGFVLTEQGHRLFLVAERIEQEIGNVPQALGAENMAANGRVRVVTMEGIGAFFLAERLVELTKHQPGIVAELVTERHIVSLTKREADIFISFIPPTGQRLVVKKLGTFRLALYASSGYISRNGMPKDHFELIHHTFVDYVEDLVAIQPVRWLLDVVDPLTVSFRSSSMHAQQNAIAAGAGIGLLPLFSAKRNPALVPILADTVQVHRDIYLSVHEDLEFLARVRSVIRHLGEVFQRDTAYMNEL*