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SCNpilot_solid_2_scaffold_502_17

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 16669..17361

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L1 n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAF8_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 99.1
  • Coverage: 230.0
  • Bit_score: 443
  • Evalue 1.30e-121
  • rbh
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.1
  • Coverage: 230.0
  • Bit_score: 443
  • Evalue 1.80e-121
rplA; 50S ribosomal protein L1; K02863 large subunit ribosomal protein L1 similarity KEGG
DB: KEGG
  • Identity: 95.2
  • Coverage: 230.0
  • Bit_score: 430
  • Evalue 2.80e-118
  • rbh

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Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 693
ATGGCTATTGGAAAGAAGCTCGTGAAGGCCCGTGAGGGCATCGACCGCGAAAAACTTTACCCGATCGCGGACGCCGTCAAACTCGTCAAGGAACGCGCTCATGCGAAGTTCGACGAGACCATCGAGATCGCGATCAACCTCGGTGTTGACCCGCGTCATGCCGACCAGATGGTGCGCGGCGTTGTCACGCTGCCGAACGGCACCGGCCGCACACTGCGCGTCGGCGTGTTCGCGCGCGGCGCCAAGGCTGATGAAGCCAAGGCTGCGGGCGCAGACGTTGTTGGCGCGGAAGAGTTGGTGGAGATTGTGCAGGGTGGCAAGATCGAGTTCGATCGTTGCATTGCGACCCCGGACATGATGCCGCTGGTCGGCCGCCTCGGTAAGGTGCTCGGCCCGCGCGGCATGATGCCGAACCCGAAGATCGGCACCGTGACCATGGACGTCGCAGCGGCTGTGAAAGGCGCCAAGGGCGGCTCGGTCGAGTTCCGCGTCGAGAAGGCTGGCATCGTCCAGGCTGGTGTTGGCAAAGCATCATTCTCGGAAGAGAAGCTCGTGCAGAACATCAAGGCGCTTGCCGATGCGGTCGCCAAAGCGAAGCCGGCGGGTGCCAAGGGCACCTACATCCAGCGCGTCGCGGTGTCTTCGACCATGGGTCCTGGCGTCAAGGTTGAGCCGGGCAGCCTGAACTCCTGA
PROTEIN sequence
Length: 231
MAIGKKLVKAREGIDREKLYPIADAVKLVKERAHAKFDETIEIAINLGVDPRHADQMVRGVVTLPNGTGRTLRVGVFARGAKADEAKAAGADVVGAEELVEIVQGGKIEFDRCIATPDMMPLVGRLGKVLGPRGMMPNPKIGTVTMDVAAAVKGAKGGSVEFRVEKAGIVQAGVGKASFSEEKLVQNIKALADAVAKAKPAGAKGTYIQRVAVSSTMGPGVKVEPGSLNS*