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SCNpilot_solid_2_scaffold_502_42

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 45367..45681

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L24 n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAD3_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 94.2
  • Coverage: 104.0
  • Bit_score: 194
  • Evalue 6.30e-47
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scra similarity UNIPROT
DB: UniProtKB
  • Identity: 95.2
  • Coverage: 104.0
  • Bit_score: 194
  • Evalue 6.80e-47
rplX; 50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 similarity KEGG
DB: KEGG
  • Identity: 88.5
  • Coverage: 104.0
  • Bit_score: 183
  • Evalue 3.50e-44

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 315
ATGGCCGCCAAGATCCGCAAGGGCGACAAGGTTGTCGTTCTCACCGGTCGTGACAAGGGGCGCACCGGCGAAGTCGTCGAAGTGCGTCCGAGCGCCAACAAGGCGCTGGTTCGTGGCGTCAATCTGGTGAAGCGCCATCAGAAGCAGACGCAGTCGCAGGAAGGCGGCATCATCTCCAAGGAGAGCCCGATCCACCTGTCGAACATCGCGCTCGTCGGCAAGGACGGCAAGCCGACCCGCGTCGGTTTCAAGATTCAGAAAGATGGCACCAAGGTGCGCATCGCCAAGAGCTCGGGAGCTGAGATCGATGGCTGA
PROTEIN sequence
Length: 105
MAAKIRKGDKVVVLTGRDKGRTGEVVEVRPSANKALVRGVNLVKRHQKQTQSQEGGIISKESPIHLSNIALVGKDGKPTRVGFKIQKDGTKVRIAKSSGAEIDG*