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SCNpilot_solid_2_scaffold_502_56

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 54031..54450

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L17 n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAB9_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 98.6
  • Coverage: 139.0
  • Bit_score: 271
  • Evalue 4.10e-70
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.6
  • Coverage: 139.0
  • Bit_score: 271
  • Evalue 5.80e-70
rplQ; 50S ribosomal protein L17; K02879 large subunit ribosomal protein L17 similarity KEGG
DB: KEGG
  • Identity: 96.4
  • Coverage: 139.0
  • Bit_score: 267
  • Evalue 1.90e-69

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 420
ATGCGTCACGGAAAAGTTCATCGTAAGCTCAACCGCACGGCGGAACACCGCAAGGCGATGTTCGCCAACATGGCGGCGGCGCTCATCAAGCACGAGCAGATCGTCACCACGCTGCCGAAGGCGAAGGAGCTTCGCCCGATCGTCGAGAAGCTTGTCACGCTCGGCAAGAAGGGTGGCCTCGCGCTGCGCCGTCAGGCCATCAGCGAGCTGCGCGACCACGATCAGGTCAAGAAGCTGTTCGACGTGCTGGCTGCTCGCTACAAGGACCGCCAGGGTGGCTACACCCGCATCATCAAGGCCGGCTTCCGCTACGGCGACAACGCACCGATGGCCGTGATCGAGTTCGTCGACCGCGACGTCGATGCCAAGGGTCAGGATTCCGGCCCGGTGCAGGAAAAGGTCGAGCCCGAGGCGGCGTAA
PROTEIN sequence
Length: 140
MRHGKVHRKLNRTAEHRKAMFANMAAALIKHEQIVTTLPKAKELRPIVEKLVTLGKKGGLALRRQAISELRDHDQVKKLFDVLAARYKDRQGGYTRIIKAGFRYGDNAPMAVIEFVDRDVDAKGQDSGPVQEKVEPEAA*