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scnpilot_cont_500_p_scaffold_160_12

Organism: SCNPILOT_CONT_500_P_Amoebophilus_asiaticus_42_9.0

near complete RP 51 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(14949..18827)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su similarity UNIPROT
DB: UniProtKB
  • Identity: 91.3
  • Coverage: 999.99
  • Bit_score: 2360
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ETZ0_AMOA5 similarity UNIREF
DB: UNIREF100
  • Identity: 91.3
  • Coverage: 999.99
  • Bit_score: 2360
  • Evalue 0.0
  • rbh
rpoB; DNA-directed RNA polymerase subunit beta similarity KEGG
DB: KEGG
  • Identity: 91.3
  • Coverage: 999.99
  • Bit_score: 2360
  • Evalue 0.0

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Taxonomy

Candidatus Amoebophilus asiaticus → Candidatus Amoebophilus → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 3879
TTGATAGAAAAGAATACCACGCACCGTTCAAGAGTTAGTTTCGCTTCTACTAGAAGCATTTCTGACTATCCTGACTTCCTTGAAATACAGCTTAAGTCCTTCAATGATTTTTTTCAGTTAGGTACGCCACCTGAAAAGAGAGTTGATGAGGGCTTGCATAAAGTTTTTAGGGAATACTTTCCTATAGAAGATTCTAGAGGAAATTTTGTACTAGAATTTATTGACTATACGCTTGACGCTCCCAAATATGATCCTAAAGAATGTGTTGAAAGAGGCGTTACCTATTCAGTCCCTCTTAAGGCTAAGTTGCGATTATTGCGCAACGATAACGATGACGAAGAGTTTGAGACCATAGAACAAGAAGTTTTTTTAGGCAATATCCCCTACATGACTTCACAAGGTTCCTTTATAATTAATGGAGCCGAACGTGTGGTGGTTTCTCAAATACACAAATCTCCCGGTGTGTTTTTTGCCCAAAGTAAACATATCAGCGGTGCGAAACTATATTCTGCTCGTATAATTCCTTTTAAAGGTGCCTGGATTGAATTTGCTACCGATGTGAATAACATCATGTATGCGTATATAGATCGGAAGAAAAAGTTTCCTATCACGACACTTTTGAGAGCTATCGGATATGGTACCGACAAAGAGATTTTAGATATATTTGGTTTATCTGAAGAAATAAAAGCAAATAAAACGAATTTAAAACAGAAAATCGGAAGAAAGCTCGCAGCACGTGTATTAAGATCTTGGACCGAAGATTTTATCGATGAAGATACCGGAGAAGTGATCACACTAGACCGTAACGAGGTAGTGTTAGAAAGAAATGCTATTATTGACGAATCTGCTATAGAAGCAATATTACAATCGGGAACTTCTTCTATAGTATTATATCGAGAAGATATCAATATTGCTGACTACGAGATCATATACAATACCCTACATAAAGATAACGCTAACTCCGAAAAAGAAGCCGTAGAACAAATATATCGCCAACTTCGTAGTTCTGAGCCGCCTGATGAACAAACAGCACGAGAAGCGATACAAAGCTTGTTTTTTAGTACCAAACGATATAGCCTTGGAGAAGTTGGTCGTTATAAAATTAACACCAAACTAGGTTTAAACATCCCCATGGATGTTAGCATACTTACCAAAGAGGATATTTTACAAATTGTTAAATATTTAATTGGGCTTATTAATTCCAAAGCTACGGTGGATGATATTGATCACTTGAGTAATAGAAGGCTTCGCAGTGTTGGTGAGCAACTATATGGTCAGTTTGAGTTAGGATTGTCTAGAATGGCTCGAACTATCCGAGAAAGGATGAATGTGAGGGACAACGAAGAATTTAAGCCTAGTGATTTAGTAAATGCGAGAACCCTCTCTTCAGTTATCAACACATTTTTTGGTACCAATCCACTCTCGCAATTTATGGACCAAGTCAATCCTTTGGCAGAGGTTACGCATAAAAGAAGGATTTCTGCTTTAGGACCTGGTGGACTTTCAAGAGATCGAGCTGGTTTTGAAATCAGGGATATTCATTATACCCACTATGGACGCCTTTGTACCGTTGAAACGCCAGAAGGACCTAATATTGGTTTGATATCTTCTTTATCTGTGCATGCTAGGATCAATGATATGGGCTTTATTGTAACCCCCTATAGAAAAATCAAAAACGGTGTGGTAGACTTCAAAGAAAATGCCCAATACCTAACTGCAGAAGAGGAAGATAAAATCAAGATTGCACAAGCCAGCTCCAAGCTAGATGACAAAGGACATTTTATAGAAGAAAAAGTAAAAACTCGTTATGCAGGAGATTTTCCGATAGTTGGCCCAGAAGATATCTCTTTCATAGATATCGCTCCTAACCAGATTGTATCTATTTCTGCTTCACTGATCCCATTCTTGGAGCATAATGATGCTAGCCGTGCGCTGATGGGTTCAAACATGCAGCGTCAGTCAGTACCACTCATTCAGCCTGAGGCACCTATTGTTGGTACAGGAATAGAAAAGCGGATCGCTCAAGATTTTAGAGGTCTGGTTCGAGCTGAAAAAGATGGGGTAGTGGAATATGTAGATGCTAATAAAATTGTAATCAATTACGACTTTACAGAAGATGAGCAGCTCATATCTTTTGATAAATCTTCTATTACTTATCCTTTACTTAAAATGAAAGGTACTAACCAAGGTACCTGTGTCAACTTAAAACCTATTGTAGCCAAAGGTGACGTTGTCAAACAAGGTCAAATCTTATGTGAAGGATATGCTACTCAAAATGGCGAACTAGCTTTAGGAAGAAATCTCAAAGTAGCCTTTATGTCTTGGCAAGGTTATAACTATGAGGATGCTATTGTTATTTCAGAGCGTATTGTAAGAGAAGATCTATTCACTTCCATTCACATAGAAGAATTCTCGTTAGAAGCACGGGACACGAAACTCGGTGAAGAAGAGTTAACCTCTGAGATTCCTAACTTAAGTGAAGAAGCTTTAAGCAATCTAGATAAAAATGGTATCGTTGCCGTCGGAACTTCTATAAAAGAAGGGGATGTACTCATTGGTAAGATAACTCCTAAAGGAGAGGCGGATCCTAGCCCTGAAGAAAAGCTTTTAAGAGCGATATTTGGTGATAAAGCAGGGGATGTAAAAGATGCTTCTCTAAAGGTACCACCTTCTATGCAAGGTGTGGTAGTAAAAACTAGATTGTTTTCAAAACCTAGAACAGATAAAAACTCTCGAGCTAAGGTCAAGAAAGAATTAGAAATCTTGAAAAAGGCGCATGCCAAACAGCTTACTGATTTGCGTGCAGTTATGATAGGGAAGCTCAAAAAGCTATTAGAAGGTGAAAAGTCAAAAGGAGTCTATCATCAATTTGGAGATGAATTAATAGCTCCAGGAAAAGCTTTCACGGCTGAGTTGATTGAGAAAAACTTATTCCCTAGCAAAAATTTATATCGAGACGAAAGCTACTACAACATTCCAGAAGAGACTAACTTGGTAGGTGAAGTAATGCTTGACAACTGGACAGATAATAAGAAGAAGAATGCGCTTATTAAAACCCTTGTTAGCAATTACAATACGAAGAGAAACGGCCTTATAGGCGATTTTAGAAGAGAAAGGTTTGCTTTAGAAATAGGAGATGAACTGCCTACAGGCATCCTTAAATTAGCTAAGGTATATGTAGCTAACAAGCGCAAGCTTCAAGCAGGAGATAAAATGGCAGGTAGACATGGTAACAAAGGTATTGTTGCCAGAGTAGTAAGAGAAGAAGATATGCCTTTCTTAGCGGATGGTTCACCAGTGGACATTGTATTGAGCCCATTGGGATTGCCTTCACGTATGAACTTGGGGCAGATATACGAAACGCTATTAGGTTGGGCAGGAGAAAAATTAGATAAAAAATATGCTACACCTATTTTTGATGGAGCTACGATCGAGGATGTAAGCAAAGAGCTGGCAGAGGCAGGATTACCCTCATTTGGAAAGGCTGAACTGTATGATGGTCTTACTGGAAAAAAGTTCGATCAACAAATAACTGTGGGAGTCATCTACATGCTGAAACTAGACCACTTAGTAGATGATAAGATGCATGCTCGTTCTATCGGACCCTACTCGTTGATTACACAACAGCCACTAGGAGGTAGGTCTCAATTCGGAGGACAGCGTTTCGGAGAAATGGAGGTGTGGGCATTAGAAGCATTTGGTGCTGCACATATCTTACAAGAAATGTTGACCACCAAATCAGATGACGTAGTTGGTCGTTCAAAAGCCTATGAGGCTATCGTAAAAGGAACAAGTTTCCCTAAGCCAGGCATACCAGAATCATTTAATGTTTTGATTCATGAGCTTAGAGGACTAGGGTTGGAGATTACGCTCAAATAA
PROTEIN sequence
Length: 1293
LIEKNTTHRSRVSFASTRSISDYPDFLEIQLKSFNDFFQLGTPPEKRVDEGLHKVFREYFPIEDSRGNFVLEFIDYTLDAPKYDPKECVERGVTYSVPLKAKLRLLRNDNDDEEFETIEQEVFLGNIPYMTSQGSFIINGAERVVVSQIHKSPGVFFAQSKHISGAKLYSARIIPFKGAWIEFATDVNNIMYAYIDRKKKFPITTLLRAIGYGTDKEILDIFGLSEEIKANKTNLKQKIGRKLAARVLRSWTEDFIDEDTGEVITLDRNEVVLERNAIIDESAIEAILQSGTSSIVLYREDINIADYEIIYNTLHKDNANSEKEAVEQIYRQLRSSEPPDEQTAREAIQSLFFSTKRYSLGEVGRYKINTKLGLNIPMDVSILTKEDILQIVKYLIGLINSKATVDDIDHLSNRRLRSVGEQLYGQFELGLSRMARTIRERMNVRDNEEFKPSDLVNARTLSSVINTFFGTNPLSQFMDQVNPLAEVTHKRRISALGPGGLSRDRAGFEIRDIHYTHYGRLCTVETPEGPNIGLISSLSVHARINDMGFIVTPYRKIKNGVVDFKENAQYLTAEEEDKIKIAQASSKLDDKGHFIEEKVKTRYAGDFPIVGPEDISFIDIAPNQIVSISASLIPFLEHNDASRALMGSNMQRQSVPLIQPEAPIVGTGIEKRIAQDFRGLVRAEKDGVVEYVDANKIVINYDFTEDEQLISFDKSSITYPLLKMKGTNQGTCVNLKPIVAKGDVVKQGQILCEGYATQNGELALGRNLKVAFMSWQGYNYEDAIVISERIVREDLFTSIHIEEFSLEARDTKLGEEELTSEIPNLSEEALSNLDKNGIVAVGTSIKEGDVLIGKITPKGEADPSPEEKLLRAIFGDKAGDVKDASLKVPPSMQGVVVKTRLFSKPRTDKNSRAKVKKELEILKKAHAKQLTDLRAVMIGKLKKLLEGEKSKGVYHQFGDELIAPGKAFTAELIEKNLFPSKNLYRDESYYNIPEETNLVGEVMLDNWTDNKKKNALIKTLVSNYNTKRNGLIGDFRRERFALEIGDELPTGILKLAKVYVANKRKLQAGDKMAGRHGNKGIVARVVREEDMPFLADGSPVDIVLSPLGLPSRMNLGQIYETLLGWAGEKLDKKYATPIFDGATIEDVSKELAEAGLPSFGKAELYDGLTGKKFDQQITVGVIYMLKLDHLVDDKMHARSIGPYSLITQQPLGGRSQFGGQRFGEMEVWALEAFGAAHILQEMLTTKSDDVVGRSKAYEAIVKGTSFPKPGIPESFNVLIHELRGLGLEITLK*