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scnpilot_cont_500_p_scaffold_122

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Displaying items 31-60 of 83 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_122_31
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33458..34171
DNA (714bp) protein (238aa)
Uncharacterized protein n=3 Tax=cellular organisms RepID=S2WWJ9_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD43781.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
winged helix family two component transcriptional regulator
scnpilot_cont_500_p_scaffold_122_32
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34168..35958
DNA (1791bp) protein (597aa)
peptidoglycan-binding protein n=1 Tax=Chryseobacterium taeanense RepID=UPI0003725658 rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD46332.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
FecR protein
scnpilot_cont_500_p_scaffold_122_33
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35986..38364
DNA (2379bp) protein (793aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Del
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2X3N8_DELAC rbh
multi-sensor signal transduction histidine kinase
scnpilot_cont_500_p_scaffold_122_34
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38835..39839)
DNA (1005bp) protein (335aa)
Heat-inducible transcription repressor hrcA n=2 Tax=Delftia acidovorans RepID=S2WVI5_DELAC rbh
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="D
hrcA; heat-inducible transcription repressor
scnpilot_cont_500_p_scaffold_122_35
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39870..40766
DNA (897bp) protein (299aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-
NAD(+) kinase (EC:2.7.1.23)
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2Y3B0_DELAC rbh
scnpilot_cont_500_p_scaffold_122_36
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40769..42544
DNA (1776bp) protein (592aa)
DNA repair protein n=1 Tax=Chryseobacterium taeanense RepID=UPI000307A19E rbh
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; C
DNA repair protein RecN
scnpilot_cont_500_p_scaffold_122_37
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42549..43451
DNA (903bp) protein (301aa)
UPF0042 nucleotide-binding protein HMPREF9701_00802 n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2X0V9_DELAC rbh
Nucleotide-binding protein HMPREF9701_00802 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="D
hypothetical protein
scnpilot_cont_500_p_scaffold_122_38
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43482..44204
DNA (723bp) protein (241aa)
Two-component system, OmpR family, catabolic regulation response regulator CreB n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2XWA0_DELAC rbh
Two-component system, OmpR family, catabolic regulation response regulator CreB {ECO:0000313|EMBL:EPD43774.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Coma
two component transcriptional regulator
scnpilot_cont_500_p_scaffold_122_39
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44221..45681
DNA (1461bp) protein (487aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Del
Two-component system, OmpR family, sensor histidine kinase CreC n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WVH9_DELAC rbh
sensory histidine kinase CreC
scnpilot_cont_500_p_scaffold_122_40
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45806..47239
DNA (1434bp) protein (478aa)
Inner membrane protein n=2 Tax=Delftia acidovorans RepID=S2XF08_DELAC rbh
Inner membrane protein {ECO:0000313|EMBL:EPD43772.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 2
inner membrane CreD family protein
scnpilot_cont_500_p_scaffold_122_41
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47236..47496
DNA (261bp) protein (87aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2WWJ3_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD43771.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
hypothetical protein
scnpilot_cont_500_p_scaffold_122_42
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47519..48589)
DNA (1071bp) protein (357aa)
adenine glycosylase n=1 Tax=Chryseobacterium taeanense RepID=UPI0002F68122 rbh
A/G-specific adenine glycosylase {ECO:0000313|EMBL:EPD43770.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovor
A/G-specific adenine glycosylase
scnpilot_cont_500_p_scaffold_122_43
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48594..50612)
DNA (2019bp) protein (673aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2X3K5_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD43769.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
hypothetical protein
scnpilot_cont_500_p_scaffold_122_44
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50930..51757)
DNA (828bp) protein (276aa)
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103, ECO:0000256|SAAS:SAAS00020852}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Formamidopyrimidine-DNA glycosylase n=2 Tax=Delftia acidovorans RepID=S2WVH5_DELAC rbh
scnpilot_cont_500_p_scaffold_122_45
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51853..53607
DNA (1755bp) protein (585aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2Y3A0_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:KEH14195.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_122_46
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53652..54164
DNA (513bp) protein (171aa)
Outer membrane lipoprotein LolB n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WWI8_DELAC rbh
Outer-membrane lipoprotein LolB {ECO:0000256|SAAS:SAAS00002103}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovo
outer membrane lipoprotein LolB
scnpilot_cont_500_p_scaffold_122_47
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54235..55098
DNA (864bp) protein (288aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:M
ipk; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2C-methyl-D-erythritol kinase n=1 Tax=Chryseobacterium taeanense RepID=UPI0002EB6381 rbh
scnpilot_cont_500_p_scaffold_122_48
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55273..56208
DNA (936bp) protein (312aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosph
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase n=2 Tax=Delftia acidovorans RepID=S2X3K2_DELAC rbh
scnpilot_cont_500_p_scaffold_122_49
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


56381..57010
DNA (630bp) protein (210aa)
50S ribosomal protein L25 n=2 Tax=Delftia acidovorans RepID=S2WVG9_DELAC rbh
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00147491}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023359}; TaxID=883101 sp
50S ribosomal protein L25
scnpilot_cont_500_p_scaffold_122_50
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

57135..57758
DNA (624bp) protein (208aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBa
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=2 Tax=Delftia acidovorans RepID=S2XF01_DELAC rbh
scnpilot_cont_500_p_scaffold_122_51
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57763..58026)
DNA (264bp) protein (88aa)
Uncharacterized protein n=3 Tax=Bacteria RepID=S2WWI6_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD43761.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
scnpilot_cont_500_p_scaffold_122_52
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58317..59279
DNA (963bp) protein (321aa)
Peptide/nickel transport system permease n=2 Tax=Delftia acidovorans RepID=S2X0V2_DELAC rbh
Peptide/nickel transport system permease {ECO:0000313|EMBL:EPD43760.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia
ABC transporter permease
scnpilot_cont_500_p_scaffold_122_53
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59276..60193
DNA (918bp) protein (306aa)
Peptide/nickel transport system permease n=3 Tax=Bacteria RepID=S2X3J7_DELAC rbh
Peptide/nickel transport system permease {ECO:0000313|EMBL:EPD43759.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia
ABC transporter permease
scnpilot_cont_500_p_scaffold_122_54
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

60208..61263
DNA (1056bp) protein (352aa)
peptide ABC transporter ATPase (EC:3.6.3.24)
ABC transporter n=1 Tax=Chryseobacterium taeanense RepID=UPI0003040AA3 rbh
Peptide/nickel transport system ATP-binding protein {ECO:0000313|EMBL:EPD43758.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" sourc
scnpilot_cont_500_p_scaffold_122_55
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

61260..62102
DNA (843bp) protein (281aa)
Peptide/nickel transport system ATP-binding protein n=2 Tax=Delftia acidovorans RepID=S2XEZ8_DELAC rbh
Peptide/nickel transport system ATP-binding protein {ECO:0000313|EMBL:EPD46284.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" sourc
ABC transporter-like protein
scnpilot_cont_500_p_scaffold_122_56
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

62239..63732
DNA (1494bp) protein (498aa)
Peptide/nickel transport system substrate-binding protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2X2P3_DELAC rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KEH14185.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia
extracellular solute-binding protein
scnpilot_cont_500_p_scaffold_122_57
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

63833..65284
DNA (1452bp) protein (484aa)
Aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2X0U9_DELAC rbh
Aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A {ECO:0000313|EMBL:EPD43755.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; De
Amidase
scnpilot_cont_500_p_scaffold_122_58
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(65271..66284)
DNA (1014bp) protein (338aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2X3J1_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD43754.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
hypothetical protein
scnpilot_cont_500_p_scaffold_122_59
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(66427..67479)
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WVF9_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD43753.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
AraC family transcriptional regulator
scnpilot_cont_500_p_scaffold_122_60
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(67550..68194)
DNA (645bp) protein (215aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2XEZ5_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD43752.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
lysine exporter protein LysE/YggA
Displaying items 31-60 of 83 in total

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