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scnpilot_cont_500_p_scaffold_154

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Displaying items 31-60 of 145 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_154_31
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25296..27947)
DNA (2652bp) protein (884aa)
Excinuclease ABC subunit A n=2 Tax=Pseudomonas aeruginosa RepID=U9HP28_PSEAI rbh
Excinuclease ABC subunit A paralog of unknown function Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
excinuclease ABC subunit A
scnpilot_cont_500_p_scaffold_154_32
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27973..29832)
DNA (1860bp) protein (620aa)
Na(+)/H(+) antiporter NhaA n=1 Tax=Pseudomonas aeruginosa BL20 RepID=U9HP78_PSEAI rbh
sodium:proton antiporter Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
sodium:proton antiporter
scnpilot_cont_500_p_scaffold_154_33
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29893..31206)
DNA (1314bp) protein (438aa)
Recombination factor protein RarA n=3 Tax=Proteobacteria RepID=M5IU12_9BURK rbh
ATPase AAA Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
recombination factor protein RarA
scnpilot_cont_500_p_scaffold_154_34
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31258..32565)
DNA (1308bp) protein (436aa)
NADH dehydrogenase transmembrane protein (EC:1.6.99.3); K03885 NADH dehydrogenase [EC:1.6.99.3] Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
NADH dehydrogenase n=2 Tax=Proteobacteria RepID=U1XWS9_9BURK rbh
pyridine nucleotide-disulfide oxidoreductase family protein
scnpilot_cont_500_p_scaffold_154_35
Burkholderia sp. Ch1-1, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32584..33414)
DNA (831bp) protein (277aa)
S-formylglutathione hydrolase (EC:3.1.2.12)
S-formylglutathione hydrolase n=4 Tax=Proteobacteria RepID=I2IMA4_9BURK rbh
S-formylglutathione hydrolase {ECO:0000313|EMBL:EIF31856.1}; TaxID=243261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia
scnpilot_cont_500_p_scaffold_154_36
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33473..34807)
DNA (1335bp) protein (445aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BL20 RepID=U9HP22_PSEAI rbh
Uncharacterized protein {ECO:0000313|EMBL:EQL42098.1}; TaxID=1350465 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerug
hypothetical protein rbh
scnpilot_cont_500_p_scaffold_154_37
Alcaligenes sp. EGD-AK7, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34990..35388)
DNA (399bp) protein (133aa)
Uncharacterized protein n=4 Tax=Proteobacteria RepID=A4G6P5_HERAR
hypothetical protein
Glyoxalase {ECO:0000313|EMBL:ERI33661.1}; TaxID=1386079 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes sp. EGD-AK7.;"
scnpilot_cont_500_p_scaffold_154_38
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35432..36541)
DNA (1110bp) protein (370aa)
S-(hydroxymethyl)glutathione dehydrogenase (EC:1.1.1.284)
glutathione-dependent formaldehyde dehydrogenase (EC:1.1.1.284); K00121 S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] Tax=RifCSPlowO2_12_Pseudomonas_60_38_c
Alcohol dehydrogenase class-3 (Alcohol dehydrogenase class-III) (S-(Hydroxymethyl)glutathione dehydrogenase) (Glutathione-dependent formaldehyde dehydrogenase) (FDH) (FALDH) n=8 Tax=Proteobacteria RepID=A4G6P6_HERAR rbh
scnpilot_cont_500_p_scaffold_154_39
Burkholderia cepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36601..36876)
DNA (276bp) protein (92aa)
Repressor FrmR n=10 Tax=Proteobacteria RepID=A4G6P7_HERAR
regulator protein FrmR
Transcriptional repressor frmR {ECO:0000313|EMBL:AIO47588.1}; TaxID=292 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia com
scnpilot_cont_500_p_scaffold_154_40
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37159..38049)
DNA (891bp) protein (297aa)
Nitrilase n=4 Tax=Proteobacteria RepID=M5IU11_9BURK rbh
nitrilase Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
nitrilase
scnpilot_cont_500_p_scaffold_154_41
Alcaligenes sp. EGD-AK7, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38046..38654)
DNA (609bp) protein (203aa)
Uncharacterized protein n=4 Tax=Proteobacteria RepID=A4G6P9_HERAR rbh
N-acetyltransferase rbh
GNAT family acetyltransferase {ECO:0000313|EMBL:ERI33657.1}; TaxID=1386079 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes sp
scnpilot_cont_500_p_scaffold_154_42
Alcaligenes sp. EGD-AK7, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38656..39063)
DNA (408bp) protein (136aa)
Uncharacterized protein n=5 Tax=Proteobacteria RepID=A4G6Q0_HERAR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERI33656.1}; TaxID=1386079 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes sp. EGD-
scnpilot_cont_500_p_scaffold_154_43
Herminiimonas arsenicoxydans, Herminiimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39218..40123
DNA (906bp) protein (302aa)
Transcriptional regulator n=4 Tax=Proteobacteria RepID=M5IZ25_9BURK rbh
transcriptional regulator rbh
Putative transcriptional regulator, LysR family {ECO:0000313|EMBL:CAL62188.1}; TaxID=204773 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herminiimonas.;" s
scnpilot_cont_500_p_scaffold_154_44
Alcaligenes sp. EGD-AK7, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40274..42250)
DNA (1977bp) protein (659aa)
UvrABC system protein B (Protein uvrB) (Excinuclease ABC subunit B) n=5 Tax=Proteobacteria RepID=A4G6Q2_HERAR rbh
UvrABC system protein B {ECO:0000256|SAAS:SAAS00009141}; TaxID=1386079 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes sp. EG
excinuclease ABC subunit B rbh
scnpilot_cont_500_p_scaffold_154_45
Burkholderia cepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43667..44482
DNA (816bp) protein (272aa)
Uncharacterized protein n=3 Tax=Pseudomonas aeruginosa RepID=U8MRC7_PSEAI rbh
lysR substrate binding domain protein
LysR substrate binding domain protein {ECO:0000313|EMBL:AIO47752.1}; TaxID=292 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepa
scnpilot_cont_500_p_scaffold_154_46
Burkholderia cepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44512..44631)
DNA (120bp) protein (40aa)
Uncharacterized protein n=2 Tax=Pseudomonas aeruginosa RepID=U8MTP3_PSEAI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIO47963.1}; TaxID=292 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;"
scnpilot_cont_500_p_scaffold_154_47
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44949..46163
DNA (1215bp) protein (405aa)
Formaldehyde dismutase n=1 Tax=Pseudomonas aeruginosa MH27 RepID=V6ADT9_PSEAI rbh
aldehyde dismutase rbh
Formaldehyde dehydrogenase, glutathione-independent {ECO:0000313|EMBL:ERV82526.1}; TaxID=1402545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.
scnpilot_cont_500_p_scaffold_154_48
Burkholderia cepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46144..46422
DNA (279bp) protein (93aa)
Uncharacterized protein n=2 Tax=Pseudomonas aeruginosa RepID=U8L9J5_PSEAI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIO49986.1}; TaxID=292 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;"
scnpilot_cont_500_p_scaffold_154_49
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46647..47537
DNA (891bp) protein (297aa)
Uncharacterized protein n=5 Tax=Pseudomonas aeruginosa RepID=U8LCU6_PSEAI rbh
bacterial regulatory helix-turn-helix , lysR family protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ERV82524.1}; TaxID=1402545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerug
scnpilot_cont_500_p_scaffold_154_50
Herminiimonas arsenicoxydans, Herminiimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47721..48626
DNA (906bp) protein (302aa)
Uncharacterized protein n=2 Tax=Pseudomonas aeruginosa RepID=U9C3F6_PSEAI rbh
hypothetical protein rbh
Putative transcriptional regulator, LysR family {ECO:0000313|EMBL:CAL62195.1}; TaxID=204773 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herminiimonas.;" s
scnpilot_cont_500_p_scaffold_154_51
Herminiimonas arsenicoxydans, Herminiimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48745..49713
DNA (969bp) protein (323aa)
Uncharacterized protein n=5 Tax=Proteobacteria RepID=A4G6Q9_HERAR rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAL62196.1}; TaxID=204773 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herminiimonas.;" source="Herminiimonas ars
scnpilot_cont_500_p_scaffold_154_52
Alcaligenes sp. EGD-AK7, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49751..51694)
DNA (1944bp) protein (648aa)
Int n=4 Tax=Proteobacteria RepID=H9U3F2_PSEAI rbh
Integrase {ECO:0000313|EMBL:ERI33445.1}; TaxID=1386079 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes sp. EGD-AK7.;"
int; integrase
scnpilot_cont_500_p_scaffold_154_53
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52263..54677)
DNA (2415bp) protein (805aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HA
anti-sigma H sporulation factor LonB (EC:3.4.21.53)
Lon protease n=2 Tax=Delftia RepID=A9C1V0_DELAS rbh
scnpilot_cont_500_p_scaffold_154_54
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54798..56060)
DNA (1263bp) protein (421aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=4 Tax=Delftia RepID=CLPX_DELAS rbh
ATP-dependent Clp protease ATP-binding subunit ClpX rbh
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiale
scnpilot_cont_500_p_scaffold_154_55
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56168..56776)
DNA (609bp) protein (203aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000256|HAMAP-R
ATP-dependent Clp protease, proteolytic subunit ClpP (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit n=4 Tax=cellular organisms RepID=S2W803_DELAC rbh
scnpilot_cont_500_p_scaffold_154_56
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56912..58222)
DNA (1311bp) protein (437aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-R
Trigger factor n=2 Tax=Delftia acidovorans RepID=S2WSX6_DELAC rbh
tig; trigger factor
scnpilot_cont_500_p_scaffold_154_57
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58791..59009
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2X2L8_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD44465.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
hypothetical protein
scnpilot_cont_500_p_scaffold_154_58
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59394..59597
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2XY59_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD44464.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
tail X family protein
scnpilot_cont_500_p_scaffold_154_59
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59599..59865
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WXE9_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD44463.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
hypothetical protein
scnpilot_cont_500_p_scaffold_154_60
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59862..60443
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2XGX3_DELAC rbh
Putative Prophage LambdaSo, lysozyme {ECO:0000313|EMBL:EZP50341.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp.
prophage LambdaSo, lysozyme
Displaying items 31-60 of 145 in total

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