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scnpilot_cont_500_p_scaffold_64_143

Organism: SCNPILOT_CONT_500_P_Delftia_66_8.1

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 146255..146854

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-24 n=1 Tax=Chryseobacterium taeanense RepID=UPI0002F73D1A similarity UNIREF
DB: UNIREF100
  • Identity: 98.0
  • Coverage: 199.0
  • Bit_score: 384
  • Evalue 6.20e-104
  • rbh
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:EPD34339.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Del similarity UNIPROT
DB: UniProtKB
  • Identity: 97.5
  • Coverage: 199.0
  • Bit_score: 383
  • Evalue 2.50e-103
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 94.5
  • Coverage: 199.0
  • Bit_score: 372
  • Evalue 6.90e-101

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Taxonomy

Delftia acidovorans → Delftia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 600
ATGCGTGACCTGATCCAGGAACTCGTGGCTCACTATGGCGATCTGCGCCGCCAGCTCACGCGCGATCTCCGGGATCCGCACTATGCGGCCGACATCGCGCAATCGAGCTTCGAGCGGGTCTATGTGCACGCCCTGGGCCTGCGCAGCGGCAAGAAGGCCGAGGCGCTGCCCGATGCCGACATCGAATCCCCGCGCGCCCTGCTGTTTCGCGTGGCACGCAACCTGTGCATAGACGATGCGCGCAAGCGCAAGACCTCCCAGGACTGGACGCGCCAGCAAATGGCGGTGCAGCACAGCGCGCCCTCCAGCGAAACCCTGGCCGCCCAGCGCCAGATCCTGGACCGCATCGTCCAGGCGCTGGAAAGCCTGCCGCCGCGCCGGCGCGAAGTCTTCATCCTCTTTCGCGCGCACGGCTACACGCGGGCAGAGATCTCCGAGCAGCTGCACATCACCGAAATGGCCGTCGCCAAGCACATGGTGCGCGCCACGCTGGACTGCTCGCGCGTGCTGGCCCAGCTGCGCTCCGAGCTGATCGAGGACCATGCGCTGGGCAGCGCCATGGATTTCGACAACAGTACACTGACCGACGACGCATCCTGA
PROTEIN sequence
Length: 200
MRDLIQELVAHYGDLRRQLTRDLRDPHYAADIAQSSFERVYVHALGLRSGKKAEALPDADIESPRALLFRVARNLCIDDARKRKTSQDWTRQQMAVQHSAPSSETLAAQRQILDRIVQALESLPPRRREVFILFRAHGYTRAEISEQLHITEMAVAKHMVRATLDCSRVLAQLRSELIEDHALGSAMDFDNSTLTDDAS*