ggKbase home page

scnpilot_cont_500_p_scaffold_183_32

Organism: SCNPILOT_CONT_500_P_Delftia_66_8.1

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(33828..34304)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Chryseobacterium taeanense RepID=UPI0002D436E2 similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 158.0
  • Bit_score: 313
  • Evalue 1.10e-82
  • rbh
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:EPD39063.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Del similarity UNIPROT
DB: UniProtKB
  • Identity: 99.4
  • Coverage: 158.0
  • Bit_score: 313
  • Evalue 2.00e-82
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 95.6
  • Coverage: 158.0
  • Bit_score: 302
  • Evalue 5.30e-80

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Delftia acidovorans → Delftia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 477
GTGCACAGCCTCTACCAGAATCACCATCCCTGGCTGGAAAGCCTGCTGCGCAAGCGCCTGGGCAACCGTGACGATGCGGCCGACCTGGCCCAGGACACCTTCGTGCGCCTGCTGCGCTCGCCAGTGCCGCAGCAGGACATCCGCGAGCCCAGGCGCTACCTGGCCACCATCGCCCGCGGCCTGGTCACCGACCTGTTTCGCCGCCGCACGCTGGAGCAGTCCTATCTGGACTATCTTGCCCAGCTGCCGCAGTCGCTGGCGCCTTCGCCCAAGGAGCAGGCCATCGTCCAGCAGACCCTGCTCGACGTGGACCGCATGCTCCAGGGCCTTGCACCCAAGGTGCGCGAAGCCTTCGTCCTGTCCCATTTCGAGGAACTGAGCTACCCCGAGATCGCCGAGCGCCTGGGCGTGTCGCTGCGCACCGTCAGCAACTACCTGACCCGGGCGATGGAGCATTGCTGCCTGGTCCTGGCATAG
PROTEIN sequence
Length: 159
VHSLYQNHHPWLESLLRKRLGNRDDAADLAQDTFVRLLRSPVPQQDIREPRRYLATIARGLVTDLFRRRTLEQSYLDYLAQLPQSLAPSPKEQAIVQQTLLDVDRMLQGLAPKVREAFVLSHFEELSYPEIAERLGVSLRTVSNYLTRAMEHCCLVLA*