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scnpilot_p_inoc_scaffold_313_35

Organism: SCNpilot_P_inoc_Acidovorax_64_34

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 14 / 38
Location: 40128..40703

Top 3 Functional Annotations

Value Algorithm Source
C4-dicarboxylate ABC transporter permease n=1 Tax=Acidovorax radicis RepID=UPI000237660E similarity UNIREF
DB: UNIREF100
  • Identity: 82.2
  • Coverage: 185.0
  • Bit_score: 313
  • Evalue 1.70e-82
  • rbh
tripartite ATP-independent periplasmic transporter DctQ component Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 191.0
  • Bit_score: 374
  • Evalue 6.70e-101
tripartite ATP-independent periplasmic transporter DctQ component similarity KEGG
DB: KEGG
  • Identity: 76.4
  • Coverage: 182.0
  • Bit_score: 285
  • Evalue 1.10e-74

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Taxonomy

RLO_Burkholderiales_64_33 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 576
ATGCTCAACGCCCTCATAGACCGGTGCTGCCGGTGGATCAACGTTCTCATCGCGCTGGCACTGGCCGTGATGGTGGTGATGGTGTTCGGCAACGTGGTGCTGCGCTACGCATTCAACTCGGGCATTGCGGTCAGCGAAGAGGTGTCGCGCTGGCTGTTCGTATGGATCACGTTCCTGGGCGCCATCGTGGCGGTGAAGGAACACGGCCACCTGGGCACCGACCTGGTTCTCACCAAGCTTCCACCCATCGCACAACGGGTGTGCCTTGTCATCAGCCACGGGCTCATGCTGTTTTGCACCTGGCTGCTGTTCAGTGGCGCCCTGTCGCAGGCACGCATCAACTGGGATGTGGAAGCGCCGGTAACCGGCGCATCGGTGGCGATCTTCTATGCGTCCGGGATGGTGTTTGCCGTGGCGTCGGGCCTGTTGTTGTTGCTCAACCTGTGGAGGCTGCTGTCGGGGCAGGTACCAGACGACCAGCTGGTGCAGACCTCCGGGTCGGAGGATGTGGCCACCCTGCCCGACATGCAGCTGGACCGCGCGGCGCTGCCGTCACGCAAGCCGCCATCCCATTGA
PROTEIN sequence
Length: 192
MLNALIDRCCRWINVLIALALAVMVVMVFGNVVLRYAFNSGIAVSEEVSRWLFVWITFLGAIVAVKEHGHLGTDLVLTKLPPIAQRVCLVISHGLMLFCTWLLFSGALSQARINWDVEAPVTGASVAIFYASGMVFAVASGLLLLLNLWRLLSGQVPDDQLVQTSGSEDVATLPDMQLDRAALPSRKPPSH*