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scnpilot_p_inoc_scaffold_475_5

Organism: SCNpilot_P_inoc_Acidovorax_64_34

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 14 / 38
Location: comp(3528..3902)

Top 3 Functional Annotations

Value Algorithm Source
pilus biosynthesis protein PilZ n=1 Tax=Acidovorax radicis RepID=UPI0002377EE7 similarity UNIREF
DB: UNIREF100
  • Identity: 96.0
  • Coverage: 124.0
  • Bit_score: 240
  • Evalue 9.10e-61
type IV pilus assembly PilZ Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 124.0
  • Bit_score: 249
  • Evalue 2.10e-63
type IV pilus assembly PilZ similarity KEGG
DB: KEGG
  • Identity: 58.7
  • Coverage: 121.0
  • Bit_score: 128
  • Evalue 1.80e-27

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Taxonomy

RLO_Burkholderiales_64_33 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 375
ATGCCCCACGAACGCCGCCACTTTGTCCGCGTCGGCTTTGACGCACCGGCCCTGCTGACCACATCCACCGACGCATTCAGCGTGCATGTACTGGACCTGTCCCTCAAAGGCGCGTTGATCATGGTGCCCGCGCAGGCCGACCTGGAGCCGGGCATGCTCTGCCAGCTGACCATTCCCCTGGCCGAAACCGGCAACCACATCGCCATGTCCACTGAAGTCGCGCATACCGAAGGCCTGCACACCGGCCTGCTGTGCCGGGGCATCGATCTGGACAGCGTGACCCACCTGCGCCGCCTGATCGAACTGCAATTGGGCGACCCCGCCTTGCTGGAGCGCGACCTGGGCGAGCTGACGCTGGCTACGCCATCCCACTGA
PROTEIN sequence
Length: 125
MPHERRHFVRVGFDAPALLTTSTDAFSVHVLDLSLKGALIMVPAQADLEPGMLCQLTIPLAETGNHIAMSTEVAHTEGLHTGLLCRGIDLDSVTHLRRLIELQLGDPALLERDLGELTLATPSH*